CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATGCGCGGAAT
TCTTTGTTTATCTCTGAACCCCATTTTTTAATGGGGTTATTTGATTTTCT
GGAGTTCACCTTCTTGAGTTATTTATATATATTAGATATTAGTGCCCTAT
CTGATTTAGGATAGGTAAAGATCCTTTCCAAATCAGTTGGTGGCCTTTTT
GTCTTATTGACTGTGTCTTTTGCTTTACAGAAGCTTTGCAATTTTATTAG
GTCCCATTTGTCAATTACAGATCTTACAGCCCAAGCCATTGCTGTTCTAT
TCAGGAATTTTTCCCCTGTGTCCATATATTTGAGGCTATTCTCCACTTTC
TCCACTATAAGTTTCAGTGCCTCTGGTTTTACTTGGAGTTCCTTGATCCA
CTTAGATTTGACCTTAGCACAAGGGGATAGGAATGGATCAATTCACATTC
TTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTG
TCTTTTTTCTACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACC
ATAGGTGTATGGCTTCATTTCTGGGTCTTCAATTGTATTCCCCTGGCCTA
CTTGTCCGTCCCTATCTCTTACCATGCCGTTTTTTTTTTCACCCCACTTG
CTCTTTAGCCCCGCTTTTACCCACGTCTGTTGAATCTCCCCCATGTTTTT
TTTCCT

AATGAAGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTAGAGAAAGGTTAATTTCAGTTTTGTTTT
GGAAGTCCGGAGCCTGGAAGGATTGGGCCTGTGGCACTGAACTTACAAAA
AGGCAGCAGGGCCTGGCTGGAAGACATGCTACAGCAAGGCTGCTCATCTC
ATTTTTAGGAAGTAAAGGAGAAGAAAAGACACAGGAGCCCCCCCAACACC
CTTTAAGAGTAGCTCCCCAGTAGCCCAAATCCCTCCCCCTAGGCCCGACC
TCCTAAGGGGTTTCTATGCTTCCCTGAGCCAGGCCAGGTATCAATTCCTT
AATGCCTGGGCATTGAAATGACACTCAAATGTCACCCTGTAGCACGTCAC
TAAATGCTTTAAGGTTCACCTTAAGGCAGATGATTCTTGTTCTAACATCT
TTTCTTTCTCAGCATCACCCATGGTGCTAAGTTTTCATCTGACTACATGG
AAGCAAGAAGTGTACTCCGTGCTCTACCTTAGAGCTCTCTGGGGCTGTGT
GTGGACAATACTGGTCATTGAAGCACAGATAAAAGGTAGGACTTCCAGGA
AGATCAATAAAGGGGAGAGGACCAGGTATTTTCTGCCTCTTGCCCTTCTT
TATTGCTTAGGGAACAGGAACAAAGACACAGTCAGCTAACCTTACTGA

Query= MSMg01no108_g24.g1 MSMg01no108_g24.g1 CHROMAT_FILE:
MSMg01no108_g24.g1 PHD_FILE: MSMg01no108_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:18 2005
         (592 letters)



>mm_chr17_70227875_70228872
          Length = 998

 Score = 1042 bits (539), Expect = 0.0
 Identities = 582/599 (97%), Gaps = 10/599 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   tagagaaagg-ttaatttcagttttgttttggaagtccggagcctggaaggattgggcct 60
           |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 798 tagagaaaggtttaatttcagttttgttttggaagtccggagcttggaaggattgggcct 739

                                                                       
Query: 61  gtggcactgaacttacaaaaaggcagcagggcctggctggaagacatgctacagcaaggc 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gcggcactgaacttacaaaaaggcagcagggcctggctggaagacatgctacagcaaggc 679

                                                                       
Query: 121 tgctcatctcatttttaggaagtaaaggagaagaaaagacacaggag---cccccccaac 177
           ||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||
Sbjct: 678 tgctcatcttatttttaggaagtaaaggagaagaaaagacacaggagccccccccccaac 619

                                                                       
Query: 178 accctttaagagtagctccccagtagcccaaatccctccccctaggcccgacctcctaag 237
           |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 618 acccttcaagagtagctccccagtagcccaaatccctccccctagg-ccgacctcctaag 560

                                                                       
Query: 238 gggtttctatgcttccctgagccaggccaggtatcaattccttaatgcctgggcattgaa 297
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gggtttctatgtttccgtgagccaggccaggtatcaattccttaatgcctgggcattgaa 500

                                                                       
Query: 298 atgacactcaaatgtcaccctgtagcacgtcactaaatgctttaaggttcacct-taagg 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 499 atgacactcaaatgtcaccctgtagcacgtcactaaatgctttaaggttca-ctgtaagg 441

                                                                       
Query: 357 cagatgattcttgttctaaca---tcttttctttctcagcatcacccatggtgctaagtt 413
           ||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagatgattcttgctctaacatcttcttttctttctcagcatcacccatggtgctaagtt 381

                                                                       
Query: 414 ttcatctgactacatggaagcaagaagtgtactccgtgctctaccttagagctctctggg 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcatctgactacatggaagcaagaagtgtactccgtgctctaccttagagctctctggg 321

                                                                       
Query: 474 gctgtgtgtggacaatactggtcattgaagcacagataaaaggtaggacttccaggaaga 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gctgtgtgtggacaatactggtcattgaagcacagataaaaggtaggacttccaggaaga 261

                                                                      
Query: 534 tcaataaaggggagaggaccaggtattttctgcctcttgcccttctttattgcttaggg 592
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcaataaaggggagaggaccaggtattttctgcctcttgcccttctttattgcttaggg 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 998
Length adjustment: 10
Effective length of query: 582
Effective length of database: 988
Effective search space:   575016
Effective search space used:   575016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)