Query= MSMg01no109_c15.b1 MSMg01no109_c15.b1 CHROMAT_FILE:
MSMg01no109_c15.b1 PHD_FILE: MSMg01no109_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:17 2005
(282 letters)
>mm_chr17_66584760_66585441
Length = 682
Score = 518 bits (268), Expect = e-151
Identities = 277/280 (98%)
Strand = Plus / Plus
Query: 1 atatggcgttgccatcacgtgatcctggcttaatccaggctgcagtacgacatgacctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatggcgttgccatcacgtgatcctggcttaatccaggctgcagtacgacatgacctca 260
Query: 61 gccgggtcttttaatccccttgagcctccctccctaccctataaagggtgacagagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccgggtcttttaatccccttgagcctccctccctaccctataaagggtgacagagtgtt 320
Query: 121 gaggggctcagcagagggtacaggtaccaaatagctcctcataccctgctctccagagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggggctcagcagagggtacaggtaccaaatagctcctcataccctgctctccagagca 380
Query: 181 ggggatggacttcatcttctatccatgctggggagagaaacatgggccccagcaggcttg 240
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 381 ggggatggacttcatcttctatccatgctggggagagaaagatgggtcccagcaggcttg 440
Query: 241 tatcgattgtatttcccagcctcagccaagatggccacgg 280
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcgattgtatttcccagcctcagccaagatggccacgg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no109_c15.g1 MSMg01no109_c15.g1 CHROMAT_FILE:
MSMg01no109_c15.g1 PHD_FILE: MSMg01no109_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:17 2005
(511 letters)
>mm_chr17_66701520_66702434
Length = 915
Score = 953 bits (493), Expect = 0.0
Identities = 508/515 (98%), Gaps = 4/515 (0%)
Strand = Plus / Minus
Query: 1 ctcagtggctagatttctcagcccacagataaccttgcttctttcaatccatcattctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctcagtggctagatttctcagcccacagataaccttgcttctttcaatccatcattctta 656
Query: 61 taaatgcgaaaagcctcaagagatatcagtcagttagaaacagtaactcggataaagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 taaatgcgaaaagcctcaagagatatcagtcagttagaaacagtaactcggataaagggg 596
Query: 121 atcatgactccattataagtactcactcagcccgcgctaataagaggaccttttgaaaag 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 595 atcatgactccattataagtactcactcagcccgtgctaataagaggaccttttgaaaag 536
Query: 181 tatgctctgctaagtatgcttagctatggcacggttcctatgctaaagtttaatggaggt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 535 tatgctctgctaagtatgcttagctacggcacggttcctatgctaaagtttaatggaggt 476
Query: 241 gaatttgagtttaaatttgcatggaaattttaaatgggacccaggaagcactaagtgact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaatttgagtttaaatttgcatggaaattttaaatgggacccaggaagcactaagtgact 416
Query: 301 tagaaatgacccagaacctttgactcagaaacagtagaaag----ggagaaagagtacta 356
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 415 tagaaatgacccagaacctttgactcagaaacagtagaaagggaaggagaaagagcacta 356
Query: 357 cagactgaaggagcggaggctgtccccgctgatcaccagtgagtcaccttgctaatattt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cagactgaaggagcggaggctgtccccgctgatcaccagtgagtcaccttgctaatattt 296
Query: 417 gatatggctccacttcaaaattctccaaatactaccaagaggaaagtcaccgcttcctgt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gatatggctccacttcaaaattctccaaatactaccaagaggaaagtcaccgcttcctgt 236
Query: 477 ttggtttggaaatacagccctgtgaaggacctgcc 511
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ttggtttggaaatacagccctgtgaaggacctgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 915
Length adjustment: 10
Effective length of query: 501
Effective length of database: 905
Effective search space: 453405
Effective search space used: 453405
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
