Query= MSMg01no116_c09.b1 MSMg01no116_c09.b1 CHROMAT_FILE:
MSMg01no116_c09.b1 PHD_FILE: MSMg01no116_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:19 2005
(319 letters)
>mm_chr17_94637276_94637994
Length = 719
Score = 578 bits (299), Expect = e-169
Identities = 314/319 (98%)
Strand = Plus / Minus
Query: 1 atgattttaaggccagcgtttgtttattgtggtgtaatgtcttggtaaaggaagaatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 atgattttaaggccagcgtttgtttattgtggtgtaatgtcttggtaaaggaagaatcaa 460
Query: 61 gagactaaaactaaggcactactggcagatataatgattgctacatcttcaatactgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gagactaaaactaaggcactactggcagatataatgattgctacatcttcaatactgact 400
Query: 121 tcatgcctccgaaagccttttcctgttgttggttgcagttgttagctgagtgagattgta 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tcatgtctccgaaagccttttcctgttgttggttgcagttgttagctgagtgagattgta 340
Query: 181 aacatggtagtgagtagcattccatcttcatggatgcagtaaccaccctattcatgtgaa 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aacatggtagtgagtagccttccatcttcatggatgcagtaaccaccctattcatgtgaa 280
Query: 241 ttcaatgaacatcgtgctgtcacctatggctcttagagtctgtcctccatcatccaactg 300
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 279 ttcaatgaacattgtgctgtcacctatggctcttagagtctgtcctccagcatccagctg 220
Query: 301 ctgcttctttctcagggtt 319
|||||||||||||||||||
Sbjct: 219 ctgcttctttctcagggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_c09.g1 MSMg01no116_c09.g1 CHROMAT_FILE:
MSMg01no116_c09.g1 PHD_FILE: MSMg01no116_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:19 2005
(293 letters)
>mm_chr17_94485900_94486593
Length = 694
Score = 545 bits (282), Expect = e-160
Identities = 291/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1 aacttccacagtgatccagagaagttaatgacttattgatgaatgacctgtcagagaaga 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aacttccacagtgatccagagaagttaatgacttattgatgaatgagctgtcagagaaga 260
Query: 61 cactgacaaccctataatattaaaatacattgatttctttaagaaaaaaa-ttcatactt 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 cactgacaaccctataatattaaaatacattgatttctttaagaaaaaaaattcatactt 320
Query: 120 ggtatgatatgatatacaaggtactgaagtaatgatatttagatttcagtattatgtaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtatgatatgatatacaaggtactgaagtaatgatatttagatttcagtattatgtaaa 380
Query: 180 acggtcaataatatttctcatttattacatattgacctctaatacttttattttccacta 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggtcaataatatttctcatttattacatattgacctctaatacttttattttccacta 440
Query: 240 gcagatgttcaaaccttatgcaagacttgtagcttaatctatagcaacatcatt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagatgttcaaaccttatgcaagacttgtagcttaatctatagcaacatcatt 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
