Query= MSMg01no116_j17.b1 MSMg01no116_j17.b1 CHROMAT_FILE:
MSMg01no116_j17.b1 PHD_FILE: MSMg01no116_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:54 2005
(550 letters)
>mm_chr17_37271047_37271993
Length = 947
Score = 1025 bits (530), Expect = 0.0
Identities = 541/546 (99%), Gaps = 3/546 (0%)
Strand = Plus / Minus
Query: 5 gaggttcaattgggacacaaaatgcaaattgatgttcttcctcttagctctcatagtcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaggttcaattgggacacaaaatgcaaattgatgttcttcctcttagctctcatagtcat 688
Query: 65 ctgacctttcatgactctgatggatatgtaccacccaaattaattatgcccttcctgagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctgacctttcatgactctgatggatatgtaccacccaaattaattatgcccttcctgagt 628
Query: 125 gagtccttgggggaaatgctgagtacaaacccaggaattccataaaatacttaaagttga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gagtccttgggggaaatgctgagtacaaacccaggaattccataaaatacttaaagttga 568
Query: 185 aacgtcttctttttcaactcccttgactgtttgttttccatatcagtgctttcctcatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aacgtcttctttttcaactcccttgactgtttgttttccatatcagtgctttcctcatga 508
Query: 245 cactggctctcaactacatcaacactgtgaaagatttcctaggagatctgctccagaatc 304
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cactggctcacaactacatcaacactgtgaaagatttcctaggagatctgctccagaatc 448
Query: 305 aaggacattcttgaagtataagattagtattgatattcagggcttgattcaaagacaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaggacattcttgaagtataagattagtattgatattcagggcttgattcaaagacaaaa 388
Query: 365 gtaaggctctttctaaaaacaatgagtcttacagtgaaagtaatttttactaaagctcaa 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 387 gtaaggctctttctaaaaacaatgagtcttacagtgaaagtaatttttactaaatctcaa 328
Query: 425 gaacagttttttcaacaacaacaacaaaaaaaaagccttgaaaaatatagtttgtaaata 484
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 327 gaacagttttttcaacaacaacaa---aaaaaaagccttgaaaaatatagtttgtaaata 271
Query: 485 tgattaaaataaacgtagtaagagaatgcaattgtatttcttttatatttgttctatgga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgattaaaataaacgtagtaagagaatgcaattgtatttcttttatatttgttctatgga 211
Query: 545 aggaaa 550
||||||
Sbjct: 210 aggaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 947
Length adjustment: 10
Effective length of query: 540
Effective length of database: 937
Effective search space: 505980
Effective search space used: 505980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_j17.g1 MSMg01no116_j17.g1 CHROMAT_FILE:
MSMg01no116_j17.g1 PHD_FILE: MSMg01no116_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:54 2005
(290 letters)
>mm_chr17_37121278_37121966
Length = 689
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 agtttccatggtgagaatttggcaggtaatattgctttccttggtaatccacattgaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 agtttccatggtgagaatttggcaggtaatattgctttccttggtaatcta-attgaagc 259
Query: 61 aaacccatatccatttattcccatcttaattactaatattctctcaaatatgacatatca 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaacccatatccatttattccaatcttaattactaatattctctcaaatatgacatatca 319
Query: 121 cactgtaaatatatgtatagatgagggtcacagaatagatgcagatattgaggaggttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cactgtaaatatatgtatagatgagggtcacagaatagatgcagatattgaggaggttac 379
Query: 181 agtagcatttcatgatgcttttgaggcgggcttatagaaatgtaaatgcaggggctagaa 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 agtagcatttcatgatgcttttgaagcgggcttatagaaatgtaaatgcaggggctagaa 439
Query: 241 agttggcccaggttaagagcatcttggtttgattctcaccacccaggctg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agttggcccaggttaagagcatcttggtttgattctcaccacccaggctg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
