Query= MSMg01no119_g15.b1 MSMg01no119_g15.b1 CHROMAT_FILE:
MSMg01no119_g15.b1 PHD_FILE: MSMg01no119_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:33 2005
(470 letters)
>mm_chr17_10151686_10152556
Length = 871
Score = 861 bits (445), Expect = 0.0
Identities = 463/469 (98%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 3 ggaattccggggtat-tctctctggtatggacaaggagttgaataaagcaatatagctgt 61
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccggggtatatatctctggtatggacaaggagttgaataaagcaatatagctgt 262
Query: 62 caagtgttcctgcctgagtgatctgtcacgggactctggggcctgtatattaatatcaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caagtgttcctgcctgagtgatctgtcacgggactctggggcctgtatattaatatcaat 322
Query: 122 acaagcttcaggtattaatatctcaagggtgtctggaaggttcttgccttagacccccct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acaagcttcaggtattaatatctcaagggtgtctggaaggttcttgccttagacccccct 382
Query: 182 ccaagcctgccaggagccctgcctatttatattgtgtttgacctgagtccaaactgctgg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccaagcctgccaggagccctgcctatttatattgtgtttgacctgagtccaaactgctgg 442
Query: 242 tgagattcttgtccacatagacaccatggctggtgtaggtttctagatttttccaggctc 301
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 tgagattcttgtccacatagacaccatggctggtgcaggtttctagatttttccaggctc 502
Query: 302 ccactgcaaaaatcctacctttccctgcagaagtaggccacagtgaatcccgctttagac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccactgcaaaaatcctacctttccctgcagaagtaggccacagtgaatcccgctttagac 562
Query: 362 acagctcatctaatgttgtgactcgcccatgatgatcccattggtccaccccacagtggc 421
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 563 acagctcatctaatgttgtgactcgcccatgaggaccccattggcccaccccacagtggc 622
Query: 422 cttcttcactctggaaaccttttctgtcttcttccaatatatcccttgg 470
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cttcttcactctggaaaccttttctgtcttcttccaatatatcccttgg 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space: 396060
Effective search space used: 396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_g15.g1 MSMg01no119_g15.g1 CHROMAT_FILE:
MSMg01no119_g15.g1 PHD_FILE: MSMg01no119_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:33 2005
(279 letters)
>mm_chr17_10222283_10222961
Length = 679
Score = 495 bits (256), Expect = e-144
Identities = 274/280 (97%), Gaps = 2/280 (0%)
Strand = Plus / Minus
Query: 1 tttt-aaacttcatctctgacagcctcagcagagccttgtcctttgggctggggctccat 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttttaaaacttcatctctgacagcctcagcagagccttgtcctttgggctggggctccat 420
Query: 60 ctcagtgtgaggtgagtgggtcccaaggcctgtgggacagcttgtgtgtagctgtgtctc 119
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 419 ctcagtgtgaggtgagtgggt-ccagggcctgtgggacagcttgtgtgtagctgtgtctc 361
Query: 120 tctgcctgaattgtgactccccagatcacaatgtgaattccaagcaggggttgcaggcta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctgcctgaattgtgactccccagatcacaatgtgaattccaagcaggggttgcaggcta 301
Query: 180 gtctacctctggctgctggcctgtttacataactccattttcttgtttccccaccttgtc 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 gtctacctctggctgctggcctgtttacataactccgttttcttgtttccccaccttgtc 241
Query: 240 tgttggcagtctcatcctgccaacagtcattatgacaggg 279
||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 240 tgttggcagcctcatcctggcaacagtcattatgacaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
