Query= MSMg01no120_f10.b1 MSMg01no120_f10.b1 CHROMAT_FILE:
MSMg01no120_f10.b1 PHD_FILE: MSMg01no120_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:44 2005
(439 letters)
>mm_chr17_48712063_48712897
Length = 835
Score = 741 bits (383), Expect = 0.0
Identities = 407/417 (97%), Gaps = 4/417 (0%)
Strand = Plus / Minus
Query: 23 ctcactgcccaacccttggtacctgatgcatttaagcacttggcttttagggttccaatt 82
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 635 ctcactgcccaacccttggtacctgatgcatttaagcacttggcttttagggtttcaatt 576
Query: 83 catgaatacgtgagtgtgcctaatctcggtgactgcactccaggaacatatctcggagca 142
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 575 catgaatacgtgagtgtgcctaatctcggtgactgcaccccaggaacatatctcggagca 516
Query: 143 gagccatgaatgtgcacaaacactcctacatccaaaactatggggaattcgacgacactt 202
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 515 gagccatgaatgtgcacaaacactcctacatccaaaactatggggaattcaacgacactt 456
Query: 203 cccagagagagagaggcctcatgagcccagagctccgtcctacacagctcatctattcca 262
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccc----agagagaggcctcatgagcccagagctccgtcctacacagctcatctattcca 400
Query: 263 tgacagcagtcctcctgttccttctagaacttgagcagcccttggataggaggatctctt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgacagcagtcctcctgttccttctagaacttgagcagcccttggataggaggatctctt 340
Query: 323 ggccatgtcctcatgcttcctgatgagcctggacagttctgtcaggatcacagaatgaga 382
|| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 339 ggtcatgtcctcatgcttcctgttgagcctggacagttctgtcaggatcacaaaatgaga 280
Query: 383 tagctgatacagcaacgtggggttgtagtccaagcatggcatgcccctgtccagcag 439
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tagctgatacagcaacgtggggttgtagtccaagcatggcatgcccctgtccagcag 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 835
Length adjustment: 9
Effective length of query: 430
Effective length of database: 826
Effective search space: 355180
Effective search space used: 355180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_f10.g1 MSMg01no120_f10.g1 CHROMAT_FILE:
MSMg01no120_f10.g1 PHD_FILE: MSMg01no120_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:44 2005
(333 letters)
>mm_chr17_48576034_48576771
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 329/338 (97%), Gaps = 5/338 (1%)
Strand = Plus / Plus
Query: 1 agtagctcggagggaaggcattcatagtccctggctgctaccttgacactcccctgaaca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agtagctcggagggaaggcattcatagtccctggctgctagcttgacactcccctgaaca 260
Query: 61 cctgcaaatgaactaatttattcctcaccaggatattatttctggtgggtcttgttttgg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 cctgcaaatgaactaatttattcctcaccaggatattatttctggcgggtcttgttttgg 320
Query: 121 atacccatttttactgacaaggaaactgagtcccggaggttgagtgactggcctaagatg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 atacccatttttactgacaaggaaactgagtcccggagtttgagtgactggcctaagatg 380
Query: 181 gttccgcctgctagggaaatagaattcttggtttccagaggcatgttcttagcctttatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttccgcctgctagggaaatagaattcttggtttccagaggcatgttcttagcctttatc 440
Query: 241 agtcagtctctactgctgctgggctcccaggccatctgaggaatggg-----gagaaaaa 295
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 441 agtcagtctctactgctgctgggctcccaggccatctgaggaatgggatggggagagaaa 500
Query: 296 caggttggggtgtggggtggggggagccgattgcccag 333
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggttggggtgtggggtggggggagccgattgcccag 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 738
Length adjustment: 9
Effective length of query: 324
Effective length of database: 729
Effective search space: 236196
Effective search space used: 236196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
