ATCATXXXXXXXXXXXXXXXXXXXXXXXCTATTTCAAAAAGAGGCGCGGA
ATTCATTTTTTTTCGTAATGATTTCAGAGCTGACTTCCTTCGAGTGGATA
ACCAAATAGGGAGTTTTTCTCTGGGAGACATTAATTTTCCCTATCTGAAC
AGTCATCAGCTGCCTGTAGTTCTTTTGGTAAAGGTGGGACTTTATTTAAA
AAATTCCCCATTGTATTAGCATTTCTGTTGACGTCATTATTCAGCATAGC
TTTTGGTAATACTCCTGTTCTTCCTTTTTGGAATAAGAAGTATATAATTT
GCTTTGTATTTTATATGTGGTCATAGTTAAGAGACTTCGAATGGGTCTTG
CAAACTTTATATGCCCCAGTACAGGGGAACACCCGGGCCAAGAATTGGGA
GTGGGTGAGTAGGGGAGCAGTGTGTGTGGGGGAGGGTATAAGGGACTTTT
ACATTCTCTGTATAGCCACTGCCCCTTTACCCCTATTCTACCTACTCCTC
TTATAATTTTTTTTCCACCGCCCCTCTATCATAACCACTTTCTATTACAT
ATTAATTTTTTTCTGATTGCTTGCTCCTGATTTATAATTTTTCTTGTATC
CTCTTCCTTTTTTATTTTTCCCCACCCACCATTTACATCACTCTTCCCCT
CCCTCACCTCACCTTTTCCCCCATAATCCTTTTATCTCAGCTGCTACACA
CATCTTTGTACCCTACAATATTTCCCCTCCTCCCT

TCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCAGACAATAGATTTAAAAATACAG
GTTAATAACATTTTCTCTACTTATGTATTCAAAGCAATAATGTCTAGTAG
CTCATAAGTCCAGTGTTTCCCGTGTCATCGTACCAATACAGGTAAAACTA
TAACCAAAGTCCTTTTTTCCCATTATTACCATTTGCAGATCAAGAATTTG
ATAAAAAACAAACAAACAAACAAAAACCTATTGTACTTTCAACAAACTTT
AATGATTAATTAAAAGTCTAATATTCATTTTTATAAGGATAAAAAATTGC
ATTAGTTGTACAAAATGGAGATTATAATTATTTATCTCAATATAGGCTGT
TTATGACTTGTCAAGTTACAGGAAAAAGGAGGGAGGGATGCTTTTCAGAG
AATGTCACAGGAAACACAAGGCAGAAAAAGGGAAAATGATAATCAACAGT
TTGAAACACTTATTTTATAACAAAGTACTACATTAATTTATTAGAGGAAA
GAATTTTGTAGCTGAAAAAACACTAAGCTTGGGGAAAAAAGGAAAACTAA
CTATTATCGAAAGAAGTACTTCTTATCTTTGTAGCATATTTCATAATGAA
GCATTCTCATAGACAGTAATACCTCAGCAAGCCCCACTTTTGCTATATTA
TACCATTAATAATCAC

Query= MSMg01no120_m13.g1 MSMg01no120_m13.g1 CHROMAT_FILE:
MSMg01no120_m13.g1 PHD_FILE: MSMg01no120_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:20 2005
         (525 letters)



>mm_chr17_62503229_62504159
          Length = 931

 Score =  963 bits (498), Expect = 0.0
 Identities = 522/532 (98%), Gaps = 8/532 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagacaatagatttaaaaatacaggttaataacattttctctacttatgtattcaaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagacaatagatttaaaaatacaggttaataacattttctctacttatgtattcaaagc 260

                                                                       
Query: 61  aataatgtctagtagctcataagtccagtgtttcccgtgtcatcgtaccaatacaggtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataatgtctagtagctcataagtccagtgtttcccgtgtcatcgtaccaatacaggtaa 320

                                                                       
Query: 121 aactataaccaaagtccttttttcccattattaccatttgcagatcaagaatttgataaa 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactataaccaaagtcctttttccccattattaccatttgcagatcaagaatttgataaa 380

                                                                       
Query: 181 aaacaaacaaacaaacaaa----aacctattgtactttcaacaaactttaatgattaatt 236
           |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacaaacaaacaaacaaacaaaaacctattgtactttcaacaaactttaatgattaatt 440

                                                                       
Query: 237 aaaagtctaatattcatttttataaggata-aaaaattgcattagttgtacaaaatggag 295
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 aaaagtctaatattcatttttataaggatacaaaaattgcattagttgtacaaaatggag 500

                                                                       
Query: 296 attataattatttatctcaatataggctgtttatgacttgtcaagttaca-ggaaaaagg 354
           ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||
Sbjct: 501 attataattatttatctcaatataggctgtttatgacttatcaagttacatggaaaa-gg 559

                                                                       
Query: 355 agggagggatgcttttcagagaatgtcacaggaaacacaaggcagaaaaagggaaaatga 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agggagggatgcttttcagagaatgtcacaggaaacacaaggcagaaaaagggaaaatga 619

                                                                       
Query: 415 taatcaacagtttgaaacacttatttt-ataacaaagtactacattaatttattagagga 473
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 taatcaacagtttgaaacacttatttttataacaaagtactacattaatttattagagga 679

                                                               
Query: 474 aagaattttgtagctgaaaaaacactaagcttggggaaaaaaggaaaactaa 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagaattttgtagctgaaaaaacactaagcttggggaaaaaaggaaaactaa 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 931
Length adjustment: 10
Effective length of query: 515
Effective length of database: 921
Effective search space:   474315
Effective search space used:   474315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)