Query= MSMg01no124_d02.b1 MSMg01no124_d02.b1 CHROMAT_FILE:
MSMg01no124_d02.b1 PHD_FILE: MSMg01no124_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:57 2005
(334 letters)
>mm_chr17_26764272_26765006
Length = 735
Score = 555 bits (287), Expect = e-162
Identities = 324/341 (95%), Gaps = 9/341 (2%)
Strand = Plus / Minus
Query: 1 ttttgtgactgggttacctcactcagggaagagaggctcttgtctaccatgggatgtagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttgtgactgggttacctcactcagggaagagaggctcttgtctaccatgggatgtagc 325
Query: 61 aagcttcctgaagggcacatcagaggaagcttgcttcagagaaagaatagctcttttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagcttcctgaagggcacatcagaggaagcttgcttcagagaaagaatagctcttttaaa 265
Query: 121 ataagctatttt-aaagacaaccaggcataaa--------gggaacagccacgttcctca 171
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 ataagctattttaaaagacaaccaggcataaagggaaaatgggaacagccacgttcctca 205
Query: 172 gtgggtgtggggaagttatgcgccagccagcatggaagggcacatgacatggccatcaca 231
|||||||| ||||||||||| |||||||| | ||||||||||||||||| ||||||||||
Sbjct: 204 gtgggtgtagggaagttatgtgccagccatcgtggaagggcacatgacacggccatcaca 145
Query: 232 aatgatgccactggtctgtaatgagaaagctaaagaaacgcaagtaatcctgtctgactg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 144 aatgatgccactggtctgtaatgagaaagctaaagaaacgcaagtaatcctggctgactc 85
Query: 292 aacagttccgcttgaggccagactgcatcccacatggcaga 332
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 84 aacagttccgcttgaggccagactgcatcccacgtggcaga 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 735
Length adjustment: 9
Effective length of query: 325
Effective length of database: 726
Effective search space: 235950
Effective search space used: 235950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_d02.g1 MSMg01no124_d02.g1 CHROMAT_FILE:
MSMg01no124_d02.g1 PHD_FILE: MSMg01no124_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:57 2005
(576 letters)
>mm_chr17_26618659_26619634
Length = 976
Score = 779 bits (403), Expect = 0.0
Identities = 418/423 (98%)
Strand = Plus / Plus
Query: 1 gaaactgggccaggcagaatacttcgtaccagcacacagaatgtcctgactactcttgat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaactgggccaggcagaatacttcataccagcacacagaatgtcctgactactcttgat 260
Query: 61 cccgtgaggcctgaaaagggtcaccctctgtccccagccttcctttttaccgccctatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccgtgaggcctgaaaagggtcaccctctgtccccagccttcctttttaccgccctatag 320
Query: 121 tggagacaatggcatcacctgtgggaactgtcatagaggctccatgagaatcttcacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagacaatggcatcacctgtgggaactgtcatagaggctccatgagaatcttcacagg 380
Query: 181 atccatccataattgctgccttctccatgttgaaggggacatattccaccactactcatg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcatccataattgctgccttctccatgttgaaggggacatattccaccactactcatg 440
Query: 241 gagcaaaactccttcccaggctggggtggcagattcaagtacctggtgatgattgaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcaaaactccttcccaggctggggtggcagattcaagtacctggtgatgattgaactc 500
Query: 301 tggcaagttcttttgcatctcagagatgctggttaaagaggcccggcaggaggtaagtat 360
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 501 tggcaagttcttttgcatctcagagatgctggggaaagagggccggcaggaggtaagtat 560
Query: 361 tagcggcttcgcaccccaacccaaccacagtcactgcagaggtaaccaggccacacagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagcggcttcgcaccccaacccaaccacagtcactgcagaggtaaccaggccacacagat 620
Query: 421 ttc 423
|||
Sbjct: 621 ttc 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
