Query= MSMg01no125_e23.b1 MSMg01no125_e23.b1 CHROMAT_FILE:
MSMg01no125_e23.b1 PHD_FILE: MSMg01no125_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:19 2005
(142 letters)
>mm_chr17_65604728_65605269
Length = 542
Score = 267 bits (138), Expect = 2e-76
Identities = 141/142 (99%)
Strand = Plus / Plus
Query: 1 atccctaataaagtatttgcctcttgaatatcaccaaactacatgtgtgaaatttggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccctaataaagtatttgcctcttgaatatcaccaaactacatgtgtgaaatttggaat 260
Query: 61 ttaaaaatattttatctatattttcagaaaggaacatcgggagccatagaaacttccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaaatattttatctatattttcagaaaggaacatcgggagccatagaaacttccatt 320
Query: 121 cctttattcttgcccataggct 142
||||||| ||||||||||||||
Sbjct: 321 cctttatccttgcccataggct 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 542
Length adjustment: 8
Effective length of query: 134
Effective length of database: 534
Effective search space: 71556
Effective search space used: 71556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no125_e23.g1 MSMg01no125_e23.g1 CHROMAT_FILE:
MSMg01no125_e23.g1 PHD_FILE: MSMg01no125_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:19 2005
(283 letters)
>mm_chr17_65787523_65788208
Length = 686
Score = 509 bits (263), Expect = e-148
Identities = 277/283 (97%), Gaps = 3/283 (1%)
Strand = Plus / Minus
Query: 1 ctctataaatggttctaagagcgggacaaccagagctggtggcctcgcgcttgccagtat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 483 ctctataaatggttctaagagcgggacaaccagagctggtggcctcgcgcttgctagtat 424
Query: 61 gaagtgggtgccactgtcaaacctgcatgtggacgtcccaaaggatgtgaccagacctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaagtgggtgccactgtcaaacctgcatgtggacgtcccaaaggatgtgaccagacctac 364
Query: 121 gataaccacttccgatgagccagacac---gtacaaacgcctgtccatcttagtgaaagc 177
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 363 gataaccacttccgatgagccagacacgttgtacaaacgcctgtccatcttagtgaaagc 304
Query: 178 ccatgacagggctgtgttagacagctatgagtactttgccgtgctcgctgctaaagaact 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccatgacagggctgtgttagacagctatgagtactttgccgtgctcgctgctaaagaact 244
Query: 238 tggcatttctattatagtacacgagccgccaaggaaaatagag 280
|||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 243 tggcatttctattaaagtacacgagccaccaaggaaaatagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 686
Length adjustment: 9
Effective length of query: 274
Effective length of database: 677
Effective search space: 185498
Effective search space used: 185498
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
