Query= MSMg01no127_p02.b1 MSMg01no127_p02.b1 CHROMAT_FILE:
MSMg01no127_p02.b1 PHD_FILE: MSMg01no127_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:52 2005
(415 letters)
>mm_chr17_94309503_94310318
Length = 816
Score = 743 bits (384), Expect = 0.0
Identities = 405/412 (98%), Gaps = 1/412 (0%)
Strand = Plus / Plus
Query: 5 gaattc-ctattgaggtgccctctaacactgacatcattctaagaactattacacatttt 63
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactattgaggtgtgctctaacactgacatcattctaagaactattacacatttt 264
Query: 64 gacccatttaaattttctccttactttctgagaatcttttatctccttttttgaggccaa 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcccatttaaattttctccttactttctgagaatcttttatctccttttttgaggccaa 324
Query: 124 cttactgaagcacagacaaactacttctctgcccaatgtatcatgctgagtgagacttta 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttactgaagcacagacaaactacttctctgcccaatgtatcatgctgagtgagacttta 384
Query: 184 catatagacaatacaaagaatgagtgtccttcaagtgaacttcaaactcttccttcctat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catatagacaatacaaagaatgagtgtccttcaagtgaacttcaaactcttccttcctat 444
Query: 244 ttgataaactaagtagttaaaatgaagactgaccatgccactcccatattttaaaagtta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgataaactaagtagttaaaatgaagactgaccatgccactcccatattttaaaagtta 504
Query: 304 tagatgaatactatggtgaaattaaagtttagtctacctgtcaaatgctcctaatctcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagatgaatactatggtgaaattaaagtttagtctacctgtcaaatgctcctaatctcta 564
Query: 364 atctcaccttccagtggcattctactgaatcaatcagtttgtctcacttgca 415
||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 565 atctcaccttctagtggcattctactgaatcaatcggtttgtctcacttgca 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 816
Length adjustment: 9
Effective length of query: 406
Effective length of database: 807
Effective search space: 327642
Effective search space used: 327642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_p02.g1 MSMg01no127_p02.g1 CHROMAT_FILE:
MSMg01no127_p02.g1 PHD_FILE: MSMg01no127_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:52 2005
(536 letters)
>mm_chr17_94439961_94440896
Length = 936
Score = 812 bits (420), Expect = 0.0
Identities = 423/424 (99%)
Strand = Plus / Minus
Query: 113 ttttatgtaattggccattctgtgttcaaggagtccttgtaaatgctgtctgtggctatt 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ttttatgtaattggccattctgtgttcaaggagtccttgtaaatgctgtctgtggctatt 877
Query: 173 ttggttttctcgggctttttctgtctggctgattcacacttgcctggttttttatgacct 232
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 876 ttggttttctcgggctttttctgtctggctgattcacacttgcctggtttgttatgacct 817
Query: 233 tggaagttttaataagtatttttcaggtactttacagagtatacctatgctggaatttgt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tggaagttttaataagtatttttcaggtactttacagagtatacctatgctggaatttgt 757
Query: 293 ctgatatttttcttacaattccagtagaaacattcacttacatgcgacagccaaaggtgg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ctgatatttttcttacaattccagtagaaacattcacttacatgcgacagccaaaggtgg 697
Query: 353 ccaagcatcatttcttaccactggataaatggtacatttccttactgtgaccatctattt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ccaagcatcatttcttaccactggataaatggtacatttccttactgtgaccatctattt 637
Query: 413 gactggcagcatttcccatgattttgtgccctgaaattctatttgtacttttcacctacc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gactggcagcatttcccatgattttgtgccctgaaattctatttgtacttttcacctacc 577
Query: 473 tccaattctgaaatttggggaaggaaatcattgtgtgtacacacttaagctgagaaaaac 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tccaattctgaaatttggggaaggaaatcattgtgtgtacacacttaagctgagaaaaac 517
Query: 533 tgtt 536
||||
Sbjct: 516 tgtt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
