CCTCATAATTGCGGCGCTAATACGATCCTAATACCGAGCGAGGCGGAATT
AGGAATTCCCAAAAAAAGAGCTCAATAACTGGTCCAGGTCTATGACTCCT
TTGGTATTGGCGACACAACCTAGGGCGTGGATTCTCATCTGCTATTGGAG
AGACCACACACACACACACACACACACACACACACACACACACACACACA
CACACACAAACACACACAGAGCCTCTTTGAAACTAAAGACAAGATTGTAT
GCTCTGCACCAGTCCCACTCTTAGAGCATACAGACAGAAGCAACCTCACA
TCTCCCCTTTTTTTTTTTTAATTGGATAGAAAAAGGTGAACCAAAATGAG
GAATCTCATTGCCCACCCCACCACATGATGAAAATATTGTACCCTTACAT
ACCTTGGGCTCATACCCACCATCCTGCACAAACATATAATATATGACAAA
GACTTCCTTGAAATTATCACCCATGAAAATGGCCCTAAAGACCCTAGAAA
TAAAATTTTACATGAAATGCAAGATTAACCTACAAGTATTGCATTATAAA
ATTATATAACCCCTTTACCACTATTTTGTACACCCACACTCTACCCCCCG
TCATAAATAAGCTACTCCACTCCGCTACCTTATAAATCCCATCAAAGCCC
AAATAGATATTCAACCAACAAACACTCCCTACACCCCCCCCATGTCCTAT
ATACCCCCACCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACAGTCATTCGGCTCTGAACCAAA
GGATTTCAGTGTGGATCCACGTGCACACAGATGGAGAAGCACACGCTGAT
GTGTTCTAAATCAGAAATTCTTTCTGTCGATATAAATTCGTGATACAAAC
CATGGTTGATTCACACCAGCTAGCGAAACATACAGATGTCAAAATGCTGG
CAACAGTTTGGAGATTACAATGCAGTAAACAAGTTAAATAGGCTGAAAAT
GTGGCCCATCATTTGTTGCCACAAGAACTAGACCGAAATCTAGGCAGCAT
GTCAGTTGTCTCTTTCTGTCTCTTTCCCCCTCTTCCCCCCTTCCCCTCTC
TCTCCCTCCCCTCCCTCTTCCTCTCCCCTCTCTCTCACATGCTGAAGTGG
GTCAACAAATAGCTGCATGTAAAACCACAAACTCAAATATAGAACCTGAC
TTGAGGTGTTCTAGATGTGGCTGCGAGTTATTTGCGGAACTTAACACAGG
TTTCAGCACATCACTGGTGCTTTCATGAGACCATGAATTCTATGGATGGA
ACTGAAAGTCAATCACCAGGTGAGGATGGGATCGGATTCCACAGGGAAGC
CTTCTGAAAGCTGCCCCTGCCCTTTAAGCTGCTGAAGGTGAACCAAGCCA
GCCCTTTA

Query= MSMg01no135_o16.g1 MSMg01no135_o16.g1 CHROMAT_FILE:
MSMg01no135_o16.g1 PHD_FILE: MSMg01no135_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:09 2005
         (437 letters)



>mm_chr17_49843689_49844525
          Length = 837

 Score =  797 bits (412), Expect = 0.0
 Identities = 431/438 (98%), Gaps = 2/438 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagtcattcggctctgaaccaaaggatttcagtgtggatccacgtgcacacagatggag 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acagtcattcgactctgaaccaaaggatttcagtgtggatccacgtgcacacagatggag 424

                                                                       
Query: 61  aagcacacgctgatgtgttctaaatcagaaattctttctgtcgatataaattcgtgatac 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aagcacacgctgatgtgttttaaatcagaaattctttctgtcgatataaattcgtgatac 364

                                                                       
Query: 121 aaaccatggttgattcacaccagctagcgaaacatacagatgtcaaaatgctggcaacag 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 363 aaaccatggttgattcacaccagctagtgaaacatacagatgtcaaaatgctggcaacag 304

                                                                       
Query: 181 tttggagattacaatgcagtaaacaagttaaataggctgaaaatgtggcccatcatttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttggagattacaatgcagtaaacaagttaaataggctgaaaatgtggcccatcatttgt 244

                                                                       
Query: 241 tgccacaagaactagaccgaaatctaggcagcatgtcagttgtctctttctgtctctttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgccacaagaactagaccgaaatctaggcagcatgtcagttgtctctttctgtctctttc 184

                                                                       
Query: 301 cccctcttccccccttcccctctc--tctccctcccctccctcttcctctcccctctctc 358
           ||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||
Sbjct: 183 cccctcttcccccctccccctctccctctccttcccctccctcttcctctcccctctctc 124

                                                                       
Query: 359 tcacatgctgaagtgggtcaacaaatagctgcatgtaaaaccacaaactcaaatatagaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcacatgctgaagtgggtcaacaaatagctgcatgtaaaaccacaaactcaaatatagaa 64

                             
Query: 419 cctgacttgaggtgttct 436
           ||||||||||||||||||
Sbjct: 63  cctgacttgaggtgttct 46


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)