Query= MSMg01no136_p23.b1 MSMg01no136_p23.b1 CHROMAT_FILE:
MSMg01no136_p23.b1 PHD_FILE: MSMg01no136_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:32 2005
(523 letters)
>mm_chr17_65296655_65297577
Length = 923
Score = 955 bits (494), Expect = 0.0
Identities = 518/530 (97%), Gaps = 8/530 (1%)
Strand = Plus / Plus
Query: 1 tgaagcttagaattttttatagacagaaagaatcactaacgacttttttgtccacctggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 194 tgaagcttagaattttttatagacagaaagaatcactaacgacttttttgtccaggtggc 253
Query: 61 agagattggtgcttgagagtattgactaatggcatgtggctacctgggctagaagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agagattggtgcttgagagtattgactaatggcatgtggctacctgggctagaagctctg 313
Query: 121 gctatgctacttgttaaatatttgtccttggtcttgactctgcct-------tatcataa 173
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 gccatgctacttgttaaatatttgtccttggtcttgactctgcctatctccttatcataa 373
Query: 174 aaataaaataaaatcaattataatacataaattatatgaaagaatgataataatggtacc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaataaaataaaatcaattataatacataaattatatgaaagaatgataataatggtacc 433
Query: 234 tacttgaaggtttgttttgatgactgagtcaagtaattaacttatttaccttgacataag 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tacttgaaggtttgttttgatgactgagtcaagtaattaacttatttaccttgacataag 493
Query: 294 atttgtcctacatgatgaaaactcaggggttttgtctttattttttatattattattatt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atttgtcctacatgatgaaaactcaggggttttgtctttattttttatattattattatt 553
Query: 354 gttagttattattattatctgcctaaatttcagaaagaagaagactttgaagagtcaaac 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gttagttattattattatctgcctaaatttcagaaagaagaagactttgaagagtcaaac 613
Query: 414 aaatgtgttctatttccatttatttatttgttcaacacatgcttactgagtacctaccat 473
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 614 aaatgtgttctatttccatttatttattcgttcaacacatgcttactgagtacctaccat 673
Query: 474 atgacacatactatctggatgccaaaaataaagaggaaaaaaagcagaca 523
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 674 atgacacatactatctggatgccaaaaataaagaggaaaaaa-gcagaca 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_p23.g1 MSMg01no136_p23.g1 CHROMAT_FILE:
MSMg01no136_p23.g1 PHD_FILE: MSMg01no136_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:33 2005
(643 letters)
>mm_chr17_65475888_65476930
Length = 1043
Score = 818 bits (423), Expect = 0.0
Identities = 426/427 (99%)
Strand = Plus / Minus
Query: 217 aaactcgggagctgaaaataacgtggttattattttatgttctgaaagtcagaaacccag 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 aaactcgggagctgaaaataacgtggttattattttatgttctgaaagtcagaaacccag 984
Query: 277 cagggtatacagaacactgggctaaaattatagctcttcatagggttggttcacttcgga 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 cagggtatacagaacactgggctaaaattatagctcttcatagggttggttcacttcgga 924
Query: 337 aaaccgagaaggtaacatgtttgattttgctttgttgtcttagtttttgacagccatcac 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aaaccgagaaggtaacatgtttgattttgctttgttgtcttagtttttgacagccatcac 864
Query: 397 attcctggccatatggcacccagcccgtttcagtagcagtagtggtgatgtacattaagt 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 attcctggccatatggcacccagcccgtttcagtagcagtagtggtgatgtacattaagt 804
Query: 457 cctcagggctcatcacagggactctctttccagcctcttcactgacagaggctggtgtgc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cctcagggctcatcacagggactctctttccagcctcttcactgacagaggctggtgtgc 744
Query: 517 ccacagtggtccttcctgggtaatctagggtcatctacatacttgaagtcagttgacaga 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccacagtggtccttcctgggtaatctagggtcatctacatacttgaagtcagttgacaga 684
Query: 577 taaagctaagtctagccgagaccttaatttcactacacgctgctacatagctgagtattc 636
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 taaagctaagtctagtcgagaccttaatttcactacacgctgctacatagctgagtattc 624
Query: 637 tgagctc 643
|||||||
Sbjct: 623 tgagctc 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
