XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAAAATGCGCGGAATTCTGG
GAGACTTCCCTAGCAAAAGAAAAAGAAGATATCGATTAAGCTGGCCACCT
TACCTGTCTCTTGAAGTTTAGAGAAACAGGAAAGATGCTAGAGTCTGTTG
CTTTGCTGGTTAAAGCGGCTGTTGAATAAAAGAAAATTAGAGAAGACAGA
ATAAAGAAAAAAAACAGAGCATATCTGAGCACAGAATGAGGACCAGCAAG
GTTCAGTATTCCTAGACACCTGCTCCTTTAAACAAAAGCCACTGGGACCA
TGACCATCCACTTGGGTGGAAACCAGTGTTTGTCTACCCACAGTAACTGG
TTATCTTTGATAACCAACATTTCAGAATGAAGGCTGACTTATCTCATAGT
GCCCCCATAGAAATGATTGTTGTGAAAAGAAACCAACTTTTCATCTGGTG
CTAATTTCATCAAATAAGGGAGACTTTATTTTATGTGTATAAAAGTTGTG
CCTGCATATATGCGTGTGCACCATGTGCACACCCAGTGTCCAAAGAGGTC
AGAAAAGGATGTCAGATAACCTAGAATTGTACCTACAAATGATTGGTTCC
CACATGGGTGCTGGGAACTGAACCTCGTGCTCTAAGAGGATAGCAAGTTT
TCTTAACTACTAAGAAATCTCTCTGGCCCTTCTAAATTTTTTTTATCAAA
TCTCTACTTTATTATTCATTGGAAAAATGCCAAGTCCTA

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXACTTCCTATTTTCCACAGCTGGTACAAGCCAT
CCCATTACACCATCCTGAGAAAGCCCTATTTCCTGCAGTGTGGCTATATT
TTCAAAAATTCTCTTTTGGTGGGGAGCCTAATATGGCATGGGAAGCCATA
GAAATTCACAAGACTTGAGGCCAAGAAGTATAGGAAGTTACAAGGCTCAC
TAAATCCCTCCCTCCAAGATATATAATTAAAAAGCAACCGGCATGGGAGT
GGATGCTCTTTGATGGGGTATTCTACAGGTTGGGCACAGGGTTCCAGGCA
CGCAGCTTTTTTGAATGAATCACTTGCCCACCTGTGCTGTGGTGGGCTTC
TCAAGGATGCAGCTGCCTTTCAGCCAGCCCACCTCTGCAAATAACTCCAG
GAAATGACTTGGTTCACCAAGGTAGACAAACTCATGTGGAGTCATTTGTC
TATTCTGTCACTTGTATGCCCCCACCCCATCCCCACCCCCGGGTCTGGGA
TGAATAGATATTTGTCCTCCTTAGGAAAAAAAATATCATAAAAGCATTCT
GCAATATTCTATCTTCTAAAGGATCCTGCTTCCCTATCCATTCTGAAATT
CCCTGCCCATATGCCTGCCTACATACCAGATCAACCCAGATAGTCCAAGG
CTCAAAAAGTAGTAGGGACGAAGCCCTTCCCACTCCACN

Query= MSMg01no137_f17.g1 MSMg01no137_f17.g1 CHROMAT_FILE:
MSMg01no137_f17.g1 PHD_FILE: MSMg01no137_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:01 2005
         (623 letters)



>mm_chr17_44287473_44288495
          Length = 1023

 Score =  851 bits (440), Expect = 0.0
 Identities = 449/452 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttcctattttccacagctggtacaagccatcccattacaccatcctgagaaagcccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 acttcctattttccacagctggtacaagccatcccattacaccatcctgagaaagcccta 393

                                                                       
Query: 61  tttcctgcagtgtggctatattttcaaaaattctcttttggtggggagcctaatatggca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttcctgcagtgtggctatattttcaaaaattctcttttggtggggagcctaatatggca 333

                                                                       
Query: 121 tgggaagccatagaaattcacaagacttgaggccaagaagtataggaagttacaaggctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgggaagccatagaaattcacaagacttgaggccaagaagtataggaagttacaaggctc 273

                                                                       
Query: 181 actaaatccctccctccaagatatataattaaaaagcaaccggcatgggagtggatgctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 actaaatccctccctccaagatatataattaaaaagcaaccggcatgggagtggatgctc 213

                                                                       
Query: 241 tttgatggggtattctacaggttgggcacagggttccaggcacgcagcttttttgaatga 300
           ||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 212 tttgatggggtagcctacaggttgggcacagggttccagacacgcagcttttttgaatga 153

                                                                       
Query: 301 atcacttgcccacctgtgctgtggtgggcttctcaaggatgcagctgcctttcagccagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atcacttgcccacctgtgctgtggtgggcttctcaaggatgcagctgcctttcagccagc 93

                                                                       
Query: 361 ccacctctgcaaataactccaggaaatgacttggttcaccaaggtagacaaactcatgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ccacctctgcaaataactccaggaaatgacttggttcaccaaggtagacaaactcatgtg 33

                                           
Query: 421 gagtcatttgtctattctgtcacttgtatgcc 452
           ||||||||||||||||||||||||||||||||
Sbjct: 32  gagtcatttgtctattctgtcacttgtatgcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)