Query= MSMg01no137_p06.b1 MSMg01no137_p06.b1 CHROMAT_FILE:
MSMg01no137_p06.b1 PHD_FILE: MSMg01no137_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:49 2005
(342 letters)
>mm_chr17_80915538_80916280
Length = 743
Score = 609 bits (315), Expect = e-179
Identities = 336/343 (97%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 attctggtcctgcaggaactgtaaggccagtcctagctggaggaagaggctttcgagatc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 attctggtcctgcaggaactgtaaggccagtcctagctggaggaacaggctttcgagatc 260
Query: 61 attctgtctgcccgtctgtctgagtttcccttctgtcatcgctagatggatgccaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctgtctgcccgtctgtctgagtttcccttctgtcatcgctagatggatgccaggaaa 320
Query: 121 caatgtcaaggagaggagagacaggttcaggccccgatagtcctaaaagcctagtgcggc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 321 caatgtcaaggagaggagagacaggttcaggccctgatagtcctaaaagcctactgcggc 380
Query: 181 tgtctctttcgttactgcagtaacatatggaaacaagcaac-ttaaaaacaaacaaaacc 239
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 381 tgtctctttcgttactgcagtaacatatggaaacaaacaaccttaaaaacaaacaaaacc 440
Query: 240 catccattttgcaatgactctagacatatagaaaagttaccatgataatgctggcaattc 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catccattttgcaatgattctagacatatagaaaagttaccatgataatgctggcaattc 500
Query: 300 ctccgtgatatatgacgtttatctagtggtaactttgcaggtt 342
|||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 ctccgtgatacatgacgtttatctagtggtaactttgcaggtt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 743
Length adjustment: 9
Effective length of query: 333
Effective length of database: 734
Effective search space: 244422
Effective search space used: 244422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_p06.g1 MSMg01no137_p06.g1 CHROMAT_FILE:
MSMg01no137_p06.g1 PHD_FILE: MSMg01no137_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:49 2005
(632 letters)
>mm_chr17_81035279_81036310
Length = 1032
Score = 1199 bits (620), Expect = 0.0
Identities = 629/632 (99%)
Strand = Plus / Minus
Query: 1 cttcaacgagtagaaatgtgagagaagaaaaaacacgctcagagataaactgtgagtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 cttcaacgagtagaaatgtgagagaagaaaaaacacgctcagagataaactgtgagtaca 773
Query: 61 gactctttaccatctgtaagtcagtgaccaaaatgagattttaaactgtagtttagttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gactctttaccatctgtaagtcagtgaccaaaatgagattttaaactgtagtttagttag 713
Query: 121 aattactatctttttaatttttaaggtatgtaaacacagttatatgtaaagtttaatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aattactatctttttaatttttaaggtatgtaaacacagttatatgtaaagtttaatgag 653
Query: 181 gactatatggattctctcgatccctctggaactttgggtaacaagaattaaacgtgtcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gactatatggattctctcgatccctctggaactttgggtaacaagaattaaacgtgtcac 593
Query: 241 acttgaaggaaaagtaaggcgtcagcctagggaaggtggatggcatcatgggaatgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 acttgaaggaaaagtaaggcgtcagcctagggaaggtggatggcatcatgggaatgctcc 533
Query: 301 tttgctgctgctaaatccttgtaagtggcctagagaccttgctaagtgcagcctgtgggt 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 532 tttgctgctgctaaatccttgtaagtggcctagagaccttgttaagtgcagcctgtgggt 473
Query: 361 cagtagagagggctagagcgtcctctgacactctgtctgtgcatgcgcctgtgctaaggg 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 472 cagtagagagggctagagcgtcctctgacactctgtgtgtgcatgcgcctgtgctaaggg 413
Query: 421 gccactctgggtgtgagctttagaaagaagtctgcaaaccagctgtgaaaccacctggga 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 412 gccactctgggtgtgagctttagaaagaaatctgcaaaccagctgtgaaaccacctggga 353
Query: 481 cttaaaagtcgtttctcaggcttcacccatccagaacctgcttgaagggctggtcttggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cttaaaagtcgtttctcaggcttcacccatccagaacctgcttgaagggctggtcttggc 293
Query: 541 cctggataaggagatacctgtagcctagcttttctgaggcttctaggtgtactctttatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cctggataaggagatacctgtagcctagcttttctgaggcttctaggtgtactctttatg 233
Query: 601 ggtagggacagataaaattatcatattcttca 632
||||||||||||||||||||||||||||||||
Sbjct: 232 ggtagggacagataaaattatcatattcttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
