Query= MSMg01no138_e05.b1 MSMg01no138_e05.b1 CHROMAT_FILE:
MSMg01no138_e05.b1 PHD_FILE: MSMg01no138_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:15 2005
(575 letters)
>mm_chr17_75493594_75494568
Length = 975
Score = 1046 bits (541), Expect = 0.0
Identities = 567/583 (97%), Gaps = 12/583 (2%)
Strand = Plus / Minus
Query: 5 gaattccatgcagtgtccgaaactttacagtccatctttcaaacatttcctattcatcag 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaattccatgcagcgtaagaaactttacagtccatctttcaaacatttcctattcatcag 679
Query: 65 aaataaaactcttcataacaaccacgctctctatgacagatgattcagtgttcagagaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaataaaactcttcataacaaccacgctctctatgacagatgattcagtgttcagagaga 619
Query: 125 ctttgccaggataaaacatctaagactgtatgtaatacgaccatgtggctgagctggcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctttgccaggataaaacatctaagactgtatgtaatacgaccatgtggctgagctggcaa 559
Query: 185 gagagtcatagaacccatggtaggctgagtgcagccagagagtgctccggcagcggcagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gagagtcatagaacccatggtaggctgagtgcagccagagagtgctccggcagcggcagc 499
Query: 245 ggtgaagtaattctccctgaggtcttcccgcctctggactctcaggctgtgcgttatagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggtgaagtaattctccctgaggtcttcccgcctctggactctcaggctgtgcgttatagt 439
Query: 305 gtgctacttgggccactgggacagagccataagaccacaaaggcagtgtattgtatggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtgctacttgggccactgggacagagccataagaccacaaaggcagtgtattgtatggaa 379
Query: 365 gatgggagacggtcacataagattctctgcaagtgatcaagaaaaaactcttcacccaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gatgggagacggtcacataagattctctgcaagtgatcaagaaaaaactcttcacccaca 319
Query: 425 tcaagagagctagggcgctgaacccttctctgtttgggatctgagtgaatatgaaaacaa 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcaagagagctagggtgctgaacccttctctgtttgggatctgagtgaatatgaaaacaa 259
Query: 485 acaagaaactctcaagggaaactcctgactgcacccgactaaagtcgcctg--------- 535
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acaagaaactctcaagggaaactcctgactgcacccgactaaagtcgcctgagtgatgaa 199
Query: 536 ---agttctccagcctgctttgcaccaaacacagatcctcagg 575
||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agcagttctccagcctgctttgcaccaaacacagatcctcagg 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_e05.g1 MSMg01no138_e05.g1 CHROMAT_FILE:
MSMg01no138_e05.g1 PHD_FILE: MSMg01no138_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:15 2005
(543 letters)
>mm_chr17_75331090_75332032
Length = 943
Score = 1019 bits (527), Expect = 0.0
Identities = 539/543 (99%)
Strand = Plus / Plus
Query: 1 acctagtgcatggctgaaaatgtgctggtctgggagccacctcaaggtctgatttttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctagtgcatggctgaaaatgtgctggtctgggagccacctcaaggtctgatttttgga 260
Query: 61 ggcttttgaaggcagatgacattagaggtatggctgcatcaccacaatgcacaatgtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcttttgaaggcagatgacattagaggtatggctgcatcaccacaatgcacaatgtctt 320
Query: 121 gaagagtgtcttcctcggtgacaatggttgacaatgaacgttgcctcttttctttttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagagtgtcttcctcggtgacaatggttgacaatgaacgttgcctcttttctttttatg 380
Query: 181 gtctgataaacatgctggcagtgttgggctcatagcaagtgcttctttaccaacaatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgataaacatgctggcagtgttgggctcatagcaagtgcttctttaccaacaatcct 440
Query: 241 tggcttcgtgatgtgtgatgtcccgtgagagccattagaggctgaaaatggtgcaagtga 300
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tggcttcgtgatgggtgatgtcccgtgagagccattagaggctgaaaatagtgcaagtga 500
Query: 301 aaatgaactgaactcgtatagtctacgagcactagatcagctacatcgtgcttggcagtg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgaactgaacgcgtatagtctacgagcactagatcagctacatcgtgcttggcagtg 560
Query: 361 atggctgctccatctcacaggagcttgtctcattggaagctgtggtcactgtcattgccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggctgctccatctcacaggagcttgtctcattggaagctgtggtcactgtcattgccc 620
Query: 421 tgtgcctcagagaagatggacttagtatcaaggctggaacgatggtcagttgacttggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgcctcagagaagatggacttagtatcaaggctggaacgatggtcagttgacttggct 680
Query: 481 tggaaacacccggtagacaaacccctgagtgcatctgtgggtatttccagagaagttaaa 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggaaacacctggtagacaaacccctgagtgcatctgtgggtatttccagagaagttaaa 740
Query: 541 ctg 543
|||
Sbjct: 741 ctg 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
