Query= MSMg01no141_g14.b1 MSMg01no141_g14.b1 CHROMAT_FILE:
MSMg01no141_g14.b1 PHD_FILE: MSMg01no141_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:46 2005
(213 letters)
>mm_chr17_61198683_61199295
Length = 613
Score = 377 bits (195), Expect = e-109
Identities = 207/211 (98%)
Strand = Plus / Plus
Query: 1 aatgataagaatgaaatgcaaaaattaaatattagagttattaaatgaataataccaaaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgataagaatgaaatgcagaaattaaatattagagttattaaatgaataataccaaaa 260
Query: 61 attaaatattagagttattaaatgaataatgcagttttatttttatgtttattctgtaat 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 attaaatattagagttattaaatgaataatacagttttatttttatgtttattctgtaat 320
Query: 121 atgtgtacattatgtcatgtgttttgatcgtatgaattcccaatatcttctcatgcgcct 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 atgtgtacattatgtcatgtgttttgatcgtatgagttcccaatatcttctcatgcgcct 380
Query: 181 tgcactcctgctgaacctcctgcccatctta 211
|||||||||||||||||||||| ||||||||
Sbjct: 381 tgcactcctgctgaacctcctgtccatctta 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no141_g14.g1 MSMg01no141_g14.g1 CHROMAT_FILE:
MSMg01no141_g14.g1 PHD_FILE: MSMg01no141_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:46 2005
(144 letters)
>mm_chr17_61356412_61356956
Length = 545
Score = 273 bits (141), Expect = 4e-78
Identities = 144/145 (99%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 1 ctatgttgatgtttaaagaggcagcgtcatta-aagaaaatgagatgagaaaaaagcatg 59
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 345 ctatgttgatgtttaaagaggcagcgtcattagaagaaaatgagatgagaaaaaagcatg 286
Query: 60 tttcctgcccagtaagtcctaagtatgctgtgtcatcatatgggttttacttctgcttag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tttcctgcccagtaagtcctaagtatgctgtgtcatcatatgggttttacttctgcttag 226
Query: 120 agaacagtttggctctgtgtgtgtg 144
|||||||||||||||||||||||||
Sbjct: 225 agaacagtttggctctgtgtgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 545
Length adjustment: 8
Effective length of query: 136
Effective length of database: 537
Effective search space: 73032
Effective search space used: 73032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
