NCCCAATCATAATTGCGGCGCTAAACGACTCCTATATTCAGAGAACCGCG
GAATTCCCTACAAAATACCAGATTAACAGAATTTACGGGAAAACAGGATT
CATCTTTCTGCTGCATCCAAGAAATACCTCAACATCAAGACAGACATCAC
CTCATGGTAAAAAGATAAGAAAAGATATTCTAGGCAAATGGACATAGAAG
CAATGCAGCCATATTAATATCTGACAAAATAGAATTCAAACCAAAACTAA
TCAAAAGAGAGGAACGGGGTTCAAGTCCCAGCAACTACATGGTGGCTCAC
AGCCATCTGTACTTGTATCCAAAGCCCTCTTCCAATATGTCTGAAGAGAA
CAATAGTGTACTCATGTAAATAAAATAAATAAATAAAATCTTACGAGAGA
GAGAGAACTACATGCTCATCACAGGAAAAATTCACCAAAGGACAGAGCAA
TTCTTAACATCTATCACGAAACACATGGGCACCTAAGTTCATAAAAGAAC
ACCACTACAACTTAAATCACAAATTAACCCTCACACACTGATAATGGGAG
ATTTCAGAAATGCACTGTCGTCAATGCACAGCTCATCCAGATGAAAACGA
AACAGCTGTAGCTACCTGATGTTATTAACCAGTAGACCTAACAGGTATTT
ACAGAATATTTAACCCGAACACAAAAGACTATGTATTCTTTTCTGCAGTT
CAAT

CCCCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGATATGTAATTTTTCAAT
AGCTTTCTTGACCTGATTTTTACAACCTGATTCTGTTTTGAGATTAGATC
TAAGAAGAATAACAGCTGGCTTCCTGGGCATGGCGGTGGCTGTCCTGCTG
TGTGGCTGCATCGTGGCCACCGTCAGCTTCTTCTGGGAGGAAAGCCTGAC
CCAGCACGTGGCCGGACTCCTATTCCTCATGACAGGTAAACTGTATACCG
ACAGCCTCCTCCCTGTGGCACACAGTACTAGGCTCGGTCATATCACTATT
AATTTTGGTTTCGGTGGTGAGGAGTGAGCAAGCAGAAGCTCATTCATCTT
TGGTAGAAAACAAAGAATTTAAAGGCAGCAGGGTACAAAGTGCACTGGTC
AATTTTCCCGCAGTAGCATTAGTAGGTCAGAGGGAAGGGTCCTGCATTCA
TTCTCAATTGGAGTCGATGCTGTATTTTCTGTCTTATTGCTTAATTCTAT
GTCTTGGGGAGAAAGGTCAGTAGCTAAAAGTCCCCTCATAGTCTATGTAC
TGGGGATGTGTCCTTGGCATTACTGTTGCAGAATTTCTTGTGTTGCGGCC
TGCTCTTGCCTCTATAGACTTATACAGCATCCGCATCCCTGTTCTTTTTT
ATTG

Query= MSMg01no144_j04.g1 MSMg01no144_j04.g1 CHROMAT_FILE:
MSMg01no144_j04.g1 PHD_FILE: MSMg01no144_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:26 2005
         (545 letters)



>mm_chr17_81388777_81389719
          Length = 943

 Score =  949 bits (491), Expect = 0.0
 Identities = 531/545 (97%), Gaps = 2/545 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgatatgtaatttttcaatagctttcttgacctgatttttacaacctgattctgtttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgatatgtaatttttcaatagctttcttgacctgatttttacaacctgattctgtttt 260

                                                                       
Query: 61  gagattagatctaagaagaataacagctggcttcctgggcatggcggtggctgtcctgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagattagatctaagaagaataacagctggcttcctgggcatggcggtggctgtcctgct 320

                                                                       
Query: 121 gtgtggctgcatcgtggccaccgtcagcttcttctgggaggaaagcctgacccagcacgt 180
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtggctgcattgtggccacggtcagcttcttctgggaggaaagcctgacccagcacgt 380

                                                                       
Query: 181 ggccggactcctattcctcatgacaggtaaactgtataccgacagcctcctccctgtggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ggccggactcctattcctcatgacaggtaaactgtataccgacagcctcctccttgtggc 440

                                                                       
Query: 241 acacagtactaggctcggtcatatcactattaattttggtttcggtggtgaggagtgagc 300
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aca--gtactaggctcggtcatatcactattaattttggtttcggtggtgaggagtgagc 498

                                                                       
Query: 301 aagcagaagctcattcatctttggtagaaaacaaagaatttaaaggcagcagggtacaaa 360
           |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 499 aagcagaagctcattcatctttggtagaaaacaaagaatttaaagggagcagtgtacaca 558

                                                                       
Query: 361 gtgcactggtcaattttcccgcagtagcattagtaggtcagagggaagggtcctgcattc 420
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtacactggtcaattttcccgcagtagcattagtaggtcagagggaagggtcctgcattc 618

                                                                       
Query: 421 attctcaattggagtcgatgctgtattttctgtcttattgcttaattctatgtcttgggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 attctcaattggagtcgatgctgtattttctgtcttattgcttaattctatgtcttgggg 678

                                                                       
Query: 481 agaaaggtcagtagctaaaagtcccctcatagtctatgtactggggatgtgtccttggca 540
           |||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||| 
Sbjct: 679 agaaaggtcagtagctaaaagtcccctcatagtctatgaaccagggacgtgtccttggcg 738

                
Query: 541 ttact 545
           |||||
Sbjct: 739 ttact 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 943
Length adjustment: 10
Effective length of query: 535
Effective length of database: 933
Effective search space:   499155
Effective search space used:   499155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)