NCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTGTTGGATC
TTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTC
TTTGAGATTGTTTATATAGTGGATTACATTGATGGATTTTCGTATATTAA
ACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATT
GCTTTAATGTGTTCTTGGATTCAGTTAGCGAGAATTTTATTGAGGATTTT
TGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTG
GATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATTAG
TTGGGTAGAGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAAC
TGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGT
CTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTTATAACTGCTTCTATT
TCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGCTTCAA
CTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCATCCAGGTTTT
CCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGG
ATTTCTTCAC

TTCCAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGAGCTGCACAGAGA
AACCCTGTCTCAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA
CAAAAACAAAACAAAAAACAAAGCAAGCAAGAAAACAAACAAACAAAGAA
AAAAGTCAATCATGAATTAAATGCTCCATTCTATTTCTGCCTACCATTTC
TTATCTTTCATCTGATGTTTTCCAACCTATTAATGTCAATTGGTTTCAAC
ACTCACATTTGTTAGATCAAGTGGTTGAAGGATGTAATTTCTGAGATGTT
TCTGATTTTAAAATTGTAGGCTCTAAATACAATTTGCCTTGAATTTTTGA
GGTCTTAGGGTGTGGGAAGAGGCCAGTTTATTAAAACTCATAAAACCATT
TTTGATGTGGATAAGGCCTAAGTTATTCTTGTTTGCCTATATGTATGCCT
AGTACTGAGATGAACATTTGATACACAGAGGGCTCTGGTTGTGTATTTGT
GGAATGGTTTGTAGGTAATCTACTTGAATTGACTGAAAAAGACTGGGAGT
GAGCCAGATTCTGACTTACTGTATTTTATAGCTGAATAACCGAGAATTGA
GCAAGCATAATGGACATGTACTTACTGAATGTTCCACAAATATTAATATT
ATAAGGACAA

Query= MSMg01no145_a03.g1 MSMg01no145_a03.g1 CHROMAT_FILE:
MSMg01no145_a03.g1 PHD_FILE: MSMg01no145_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:59 2005
         (559 letters)



>mm_chr17_94266020_94266978
          Length = 959

 Score =  984 bits (509), Expect = 0.0
 Identities = 539/559 (96%), Gaps = 16/559 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggacagccagagctgcacagagaaaccctgtctcaaaacaaaacaaaacaaaacaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 caggacagccagagctgcacagagaaaccctgtctcaaaacaaaacaaaacaaaacaaaa 785

                                                                       
Query: 61  caaaacaaaacaaaacaaaaacaaaacaaaaaacaaagcaagcaagaaaacaaacaaaca 120
           |                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 c----------------aaaacaaaacaaaaaacaaagcaagcaagaaaacaaacaaaca 741

                                                                       
Query: 121 aagaaaaaagtcaatcatgaattaaatgctccattctatttctgcctaccatttcttatc 180
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 740 aagaaaaaagtcaatcatgatttagatgctccattctatttctgcctaccatttcttatc 681

                                                                       
Query: 181 tttcatctgatgttttccaacctattaatgtcaattggtttcaacactcacatttgttag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttcatctgatgttttccaacctattaatgtcaattggtttcaacactcacatttgttag 621

                                                                       
Query: 241 atcaagtggttgaaggatgtaatttctgagatgtttctgattttaaaattgtaggctcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atcaagtggttgaaggatgtaatttctgagatgtttctgattttaaaattgtaggctcta 561

                                                                       
Query: 301 aatacaatttgccttgaatttttgaggtcttagggtgtgggaagaggccagtttattaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatacaatttgccttgaatttttgaggtcttagggtgtgggaagaggccagtttattaaa 501

                                                                       
Query: 361 actcataaaaccatttttgatgtggataaggcctaagttattcttgtttgcctatatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actcataaaaccatttttgatgtggataaggcctaagttattcttgtttgcctatatgta 441

                                                                       
Query: 421 tgcctagtactgagatgaacatttgatacacagagggctctggttgtgtatttgtggaat 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 440 tgcctactactgagatgaacatttgatacacagagggctctggttgtgtatttatggaat 381

                                                                       
Query: 481 ggtttgtaggtaatctacttgaattgactgaaaaagactgggagtgagccagattctgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtttgtaggtaatctacttgaattgactgaaaaagactgggagtgagccagattctgac 321

                              
Query: 541 ttactgtattttatagctg 559
           |||||||||||||||||||
Sbjct: 320 ttactgtattttatagctg 302


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 8
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space:   521001
Effective search space used:   521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)