Query= MSMg01no145_g15.b1 MSMg01no145_g15.b1 CHROMAT_FILE:
MSMg01no145_g15.b1 PHD_FILE: MSMg01no145_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:29 2005
(664 letters)
>mm_chr17_10885944_10887008
Length = 1065
Score = 1199 bits (620), Expect = 0.0
Identities = 650/660 (98%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 6 ggaattcataaaagg-aacaggctggtaaagtgaggggagaaatattttaagttaataat 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcataaaaggaaaaaggctggtaaagtgaggggagaaatattttaagttaataat 265
Query: 65 gataattttccccaaagttaatacatctgtaatgaggagtcccaagtgtagcacaagcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gataattttccccaaagttaatacatctgtaatgaggagtcccaagtgtagcacaagcca 325
Query: 125 atggcatcaagctgatgataagaatggggaccgagataccggaaccaggacaggagtggc 184
|||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||
Sbjct: 326 atggcatcaagctgatgacaagaatggggaccgcgacaccagaaccaggacaggagtggc 385
Query: 185 aacagatgttttctcagcaacagcctggaacagaaaacacaggggcagattctcctttgg 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacagatgttttcttagcaacagcctggaacagaaaacacaggggcagattctcctttgg 445
Query: 245 tgaaggatcaaaactctgagcctaaaattccaagcacatcaaaatacctctcagaaacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgaaggatcaaaactctgagcctaaaattccaagcacatcaaaatacctctcagaaacaa 505
Query: 305 gttttaaagaaaacacagttagaaatagaaaagctaaaataatccttctgaacacacttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gttttaaagaaaacacagttagaaatagaaaagctaaaataatccttctgaacacacttg 565
Query: 365 gatggtggagttcttttgatagaaagaaaggctagcaaataccgtctgtgtgcacgcagg 424
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 566 gatggtggagttcttttgatagaaagaaaggctagcaagtaccgtctgtgtgcacgcagg 625
Query: 425 acggtgtgaattcaggatggtatgcattcaggatggtgtgcacacaggatggtgtgtgca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 acggtgtgaattcaggatggtatgcattcaggatggtgtgcacacaggatggtgtgtgca 685
Query: 485 caggacagtgtgcatgggggcacggggaggggagaaaaacttgagttaatacttttattt 544
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 686 caggacagtgtgcatgggggcacggggaggggagaaagacttgagttaacacttttattt 745
Query: 545 tcagaactggggagtgaaggtacagcctcgtatatgctgggtaaacattctacctttgca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tcagaactggggagtgaaggtacagcctcgtatatgctgggtaaacattctacctttgca 805
Query: 605 ctctaagccagaagccccattttggatagatattttttaaaatactgaatgcttactgcc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ctctaagccagaagccccattttggatagatattttttaaaatactgaatgcttactgcc 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space: 689970
Effective search space used: 689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_g15.g1 MSMg01no145_g15.g1 CHROMAT_FILE:
MSMg01no145_g15.g1 PHD_FILE: MSMg01no145_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:29 2005
(633 letters)
>mm_chr17_10939465_10940497
Length = 1033
Score = 789 bits (408), Expect = 0.0
Identities = 411/412 (99%)
Strand = Plus / Minus
Query: 222 ctggctccaactgacccagacaacaggcagtgctataaacatgactgtttatcaactaat 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 ctggctccaactgacccagacaacaggcagtgctataaacatgactgtttatcaactaat 974
Query: 282 atccataaatgttctgctcaacatttatggtggatattcattttagaagattgctttcaa 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 atccataaatgttctgctcaacatttatggtggatattcattttagaagattgctttcaa 914
Query: 342 cctccatatttactgctttcagcaaatgacactcatgtattgttctgggccaggagtagg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 cctccatatttactgctttcagcaaatgacactcatgtattgttctgggccaggagtagg 854
Query: 402 gaagagtaaataaattaagaatcaagaccctcttgtatttatggtaatcttggcaggatt 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 gaagagtaaataaattaagaatcaagaccctcttgtatttatggtaatcttggcaggatt 794
Query: 462 gtttctgccttaaactgtatatgtttttacatttgtgttacatggtttttgctgattctt 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gtttctgccttaaactgtatatgtttttacatttgtgttacatggtttttgctgattctt 734
Query: 522 tgaagtaagggaccattttatttccaacctcaaaacaattaagtttttgttttgttcctt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tgaagtaagggaccattttatttccaacctcaaaacaattaagtttttgttttgttcctt 674
Query: 582 tttctttgctttaactgtgcacagtatcttgcacatgttgaggatttattta 633
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 673 tttctttgctttaactgtgcacagtatcttgcacatgtcgaggatttattta 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
