Query= MSMg01no147_k02.b1 MSMg01no147_k02.b1 CHROMAT_FILE:
MSMg01no147_k02.b1 PHD_FILE: MSMg01no147_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:16 2005
(350 letters)
>mm_chr17_79796145_79796894
Length = 750
Score = 669 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Minus
Query: 5 gaattcacttactggcattaatggcacccgttacagtgtgtggtgatgtgtgcctaaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaattcacttactggcattaatggcacccgttacagtgtgtggtgatgtgtgcctaaatt 491
Query: 65 ctcctgctacaatgtttccttgttttaatttttattttcaactgattctcaactatcact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctcctgctacaatgtttccttgttttaatttttattttcaactgattctcaactatcact 431
Query: 125 ttcttacacataggggttatatctgtattgtcttttaaacctggtatgtgtagagtgcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttcttacacataggggttatatctgtattgtcttttaaacctggtatgtgtagagtgcac 371
Query: 185 ttgaaaacatttaaattgatgagtaaatgactcatttaaagaattggagacagacagtac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgaaaacatttaaattgatgagtaaatgactcatttaaagaattggagacagacagtac 311
Query: 245 tatatgatgcactatctccagccctttataatgtgtctcttatgcatgttatgttactga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatatgatgcactatctccagccctttataatgtgtctcttatgcatgttatgttactga 251
Query: 305 atgttcttactacttttcatatcaatataacatgtcaagaccagta 350
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgttcttactacttttcatatcaatataacatgtcaagaccagta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_k02.g1 MSMg01no147_k02.g1 CHROMAT_FILE:
MSMg01no147_k02.g1 PHD_FILE: MSMg01no147_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:16 2005
(612 letters)
>mm_chr17_79695469_79696479
Length = 1011
Score = 1176 bits (608), Expect = 0.0
Identities = 611/612 (99%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 1 tttcattggtctgggccccctgcttccttcttttctccttagacacctctgcactttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcattggtctgggccccctgcttccttcttttctccttagacacctctgcactttgta 260
Query: 61 gtttctgtctcccctcttctcccctcctgtccctgctattcccaccgtgtgatacaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttctgtctcccctcttctcccctcctgtccctgctattcccaccgtgtgatacaaaga 320
Query: 121 ttcagaggtgagaaaggacagtgcgtgcatgcaggaagtttgagtaattcagtaaatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcagaggtgagaaaggacagtgcgtgcatgcaggaagtttgagtaattcagtaaatttc 380
Query: 181 catcactgaaccttggcactacagtggggttcgtttatagaagtggaaactggcttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcactgaaccttggcactacagtggggttcgtttatagaagtggaaactggcttggtt 440
Query: 241 tttagtcttttttttttttcttcactgattttttttaaaggtaaaattgaaaggaagcat 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttagtcttttttttttt-cttcactgattttttttaaaggtaaaattgaaaggaagcat 499
Query: 301 tatgcgaaggaagatcacacacatttgaacaagcttctaactcagatatgagttagtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatgcgaaggaagatcacacacatttgaacaagcttctaactcagatatgagttagtctc 559
Query: 361 agctctaactcagtcagagacagagacttttctttttaaataactacacacacagtgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agctctaactcagtcagagacagagacttttctttttaaataactacacacacagtgaga 619
Query: 421 caggtaccttggaggggaacccattaattctggtcctaaatttgtcacattatacacaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caggtaccttggaggggaacccattaattctggtcctaaatttgtcacattatacacaac 679
Query: 481 caaataaggaatatatttagaagtgcatctacaatgtgctatatgtatgtgcatatatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caaataaggaatatatttagaagtgcatctacaatgtgctatatgtatgtgcatatatgt 739
Query: 541 gggtgaatacctatgtttatagctatatattaatattcttgtgtggttgttttaggataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gggtgaatacctatgtttatagctatatattaatattcttgtgtggttgttttaggataa 799
Query: 601 aaaaaatacctt 612
||||||||||||
Sbjct: 800 aaaaaatacctt 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1011
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1001
Effective search space: 602602
Effective search space used: 602602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
