Query= MSMg01no149_f21.b1 MSMg01no149_f21.b1 CHROMAT_FILE:
MSMg01no149_f21.b1 PHD_FILE: MSMg01no149_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:36 2005
(592 letters)
>mm_chr17_70848339_70849331
Length = 993
Score = 1054 bits (545), Expect = 0.0
Identities = 581/593 (97%), Gaps = 1/593 (0%)
Strand = Plus / Plus
Query: 1 gagagaatgagagccagagacccaagatagctcaggaaccacagctatccagagatagcc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 gagagaatgagagccagagacccaagatagctcaggaactacagctatccagagatagcc 260
Query: 61 caggaaccacagctgtccacatggtttctgaagtagatcttggggtgatgcatttgatct 120
|||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 261 caggaaccacagctgtccacatggtttctgcaggagatctttgggtgatgcatttgatct 320
Query: 121 aacatccctaagccagcatttagagtgtctgaaggctcctctctattgccaagtgggagg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatccctaagccagcatttagaatgtctgaaggctcctctctattgccaagtgggagg 380
Query: 181 gaa-tcccagcatatttactagtaggtgatactagtgcatggggcagtagggtaggggtg 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattcccagcatatttactagtaggtgatactagtgcatggggcagtagggtaggggtg 440
Query: 240 aagctccgaaactagttgtagtagaacaaacgtggggtcctactgtagaccttatagaaa 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 aagctccgaaactagttgtagtagaacaaatgtggggtcctactgtagaccttatagaaa 500
Query: 300 cttgaaagaagagaggaattatggagagacccactaatccattaaacacacatgtaccgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgaaagaagagaggaattatggagagacccactaatccattaaacacacatgtaccgt 560
Query: 360 gcacctgccctgtgccaatgtccccccagacaggtatcatctacatttcaccagcttttc 419
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcacctgccctgtgccaatgttctcccagacaggtatcatctacatttcaccagcttttc 620
Query: 420 acagttctagttggcactgcttttggtactgtttttctactcatgttaatgcatttcaat 479
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atagttctagttggcactgcttttggtactgtttttctactcatgttaatgcatttcaat 680
Query: 480 atatttattgtttacaaagaaattgaatgtcacttctattagccttgccatttgagataa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatttattgtttacaaagaaattgaatgtcacttctattagccttgccatttgagataa 740
Query: 540 aggctaaccgtgagaataagaacaacggaccaaaaaatgttatttacttctaa 592
||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 741 aggctaaccgtgagaataagaacaatggaccataaaatgttatttacttctaa 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 993
Length adjustment: 10
Effective length of query: 582
Effective length of database: 983
Effective search space: 572106
Effective search space used: 572106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_f21.g1 MSMg01no149_f21.g1 CHROMAT_FILE:
MSMg01no149_f21.g1 PHD_FILE: MSMg01no149_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:36 2005
(581 letters)
>mm_chr17_70963432_70964412
Length = 981
Score = 687 bits (355), Expect = 0.0
Identities = 358/359 (99%)
Strand = Plus / Minus
Query: 1 tcccactcacacaaaatgaatgaatactgatttaagagtcagtgatgatcattagctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcccactcacacaaaatgaatgaatactgatttaagagtcagtgatgatcattagctatt 300
Query: 61 atgggatactattcatatctatacgttttaatgtgaattaaattacatcagcccatcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atgggatactattcatatctatacgttttaatgtgaattaaattacatcagcccatcact 240
Query: 121 gcggaaatgagacacagttttaaaaggcaaatgaggaatgggtgggggagatggctcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gcggaaatgagacacagttttaaaaggcaaatgaggaatgggtgggggagatggctcagt 180
Query: 181 tggcagagtgcttgctgtacaagcatggacatctgagttcaatctccaggactgatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggcagagtgcttgctgtacaagcatggacatctgagttcaatctccaggactgatgttt 120
Query: 241 aaaaaacaaaacaaaacaaaaacaaaaacaagccagctgtggtggcctgcttgtaatcct 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 119 aaaaaacaaaacaaaacaaaaaccaaaacaagccagctgtggtggcctgcttgtaatcct 60
Query: 301 cctactcacaagctgacggacttccctatttgccgagttctaaggcgataagggaccca 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 cctactcacaagctgacggacttccctatttgccgagttctaaggcgataagggaccca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
