TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACATAAAGCCACAGACAGTGAAACTTATAGAGGAGAAAGTGGGG
AAAAGTCTCGAAGATATGGGCACAGGTGAAAGATTCCTGAATAGAACATC
AATGGCTTGGGTTGTAAGATTGAGAATCGACAAATGGGACTTAATAAAAT
TGCTAAGTTTCTATAAGGCAAAAGACACTGCCAATAAGACAAAAAGGCCA
CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAGAGGGGACT
AATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAA
ATAACCCCATTGAAAATGGGGCTCAGAGCTAAACAAAGAATTCTCATCTG
AGGAATACTGAATGGTTAGAAGCACCTGAAAAAATGTTCAATCTCCTTAA
TCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCT
GTCAGAATGGCTAAGGTCAAAAATTCAGGTGACAACAGATGCTGTCGAGG
ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTG
TACAACCACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATA
GTCCTACTGGAGGATGCCGCAATACCTCTCCTGGGCATATTTCCAGAAGA
TGTTCCA

NCCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGAATGCTACAGAGCATGCCACCA
AAAACTATATGCAATTTAAGACTGAAAGTCCTAAAGAAGCACTAAGAAGC
AGCCAGTAAAAAAGTGGCAAAGAGATCTGAGAATAGGGGAGTGGTTCACA
GTGTGTACAGCACAGGGCAAAGCAGCAGAGAAACCCTCGTTTTCATTCAT
ATTAGTGTATTCTTCACACCTTCAGTTCCACCATTTCTCATTGCCATCCA
AAACAAAGGAGGACTTTTGGATGTGGGAGAGAAATAAATGTCAATGATAA
GCTAAACCTATACTTTTGCTGTTTGGCTAAACACTTTTCATGAATTTATT
TGTTTGCTTCAGGACACTGGGTTATAAGCAGCATTTTCCAGGGCACTCAA
TTAAGTTACATCACAGCCGGCTCTTCAATAGTGGGTAGAGAACAGCTTTC
TTAGCCACCATATAAAGCTGACCCTGGGTATATTCTCTAAGGCTTGCAGA
TGAAACTTCTGACTTAGTCTTGCAAAGAAGAGGACACGAGAAGACCAAAG
TTTTAATAAAGACAAGGGTACATTCTTTCCTAGGGCATCTTTTCCTCAGC
AGTACTTACCATAGATTATTAAATGTGTTTTTTTTTTTCTTGTTTATGGN
CTTCACTG

Query= MSMg01no149_o22.g1 MSMg01no149_o22.g1 CHROMAT_FILE:
MSMg01no149_o22.g1 PHD_FILE: MSMg01no149_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:21 2005
         (619 letters)



>mm_chr17_93623528_93624544
          Length = 1017

 Score = 1137 bits (588), Expect = 0.0
 Identities = 612/620 (98%), Gaps = 4/620 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaatgctacagagcatgccaccaaaaactatatgcaatttaagactgaaagtcctaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaatgctacagagcatgccaccaaaaactatatgcaatttaagactgaaagtcctaaag 260

                                                                       
Query: 61  aagcactaagaagcagccagtaaaaaagtggcaaagagatctgagaataggggagtggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcactaagaagcagccagtaaaaaagtggcaaagagatctgagaataggggagtggtt 320

                                                                       
Query: 121 cacagtgtgtacagcacagggcaaagcagcagagaaaccctcgttttcattcatattagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagtgtgtacagcacagggcaaagcagcagagaaaccctcgttttcattcatattagt 380

                                                                       
Query: 181 gtattcttcacaccttcagttccaccatttctcattgccatccaaaacaaaggaggactt 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgttcttcacaccttcagttccaccatttctcattgccatccaaaacaaaggaggactt 440

                                                                       
Query: 241 ttggatgtgggagagaaataaatgtcaatgataagctaaacctatacttttgctgtttgg 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttggatgtgggagagaaataa-tgtcaatgataagctaaacctatacttttgctgtttgg 499

                                                                       
Query: 301 ctaaacacttttcatgaatttatttgtttgcttcaggacactgggttataagcagcattt 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 500 ctaaacacttttcatgaatttatttgtttgcttcaggacactgagttataagcagcattt 559

                                                                       
Query: 361 tccagggcactcaattaagttacatcacagcc-ggctcttcaatagtgggtagagaacag 419
           |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 560 tccagggcactcaattaagttacatcacagccagg-tcttcaatagtgggtagagaacag 618

                                                                       
Query: 420 ctttcttagccaccatataaagctgaccctgggtatattctctaaggcttgcagatgaaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctttcttagccaccatataaagctgaccctgggtatattctctaaggcttgcagatgaaa 678

                                                                       
Query: 480 cttctgacttagtcttgcaaagaagaggacacgagaagaccaaagttttaataaagacaa 539
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 679 cttctgacttagtcttgcaaagaagagaacacgagaagaccaaagttttaataaagacaa 738

                                                                       
Query: 540 gggtacattctttcctagggcatcttttcctcagcagtacttaccatagattattaaatg 599
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gggtacattctttcgtagggcatcttttcctcagcagtacttaccatagattattaaatg 798

                               
Query: 600 tgtttttttttttcttgttt 619
           |||||||||||| |||||||
Sbjct: 799 tgtttttttttt-cttgttt 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1017
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1007
Effective search space:   613263
Effective search space used:   613263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)