CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACTTCTACTGGGATGGCCGTCAAAAGTTTACTGTCTCCCGCAGG
GAGCCGGCTGGTTTTTAGTGACTTGGCCTGATATCAAAATAGCTGCAATT
AAATGGATTTGTGAGGGTCAGATGAGATATTCAAACAGAGGGTACTCCCC
ATGGAACTAAAATCATGCTTAGCACATGTTCAAGTTACATATGCCGCCCA
GGGCAAATGGCTGTGAGACACAAAGTAGGTCAACGTAACTCCCTGCGGTG
CTCACTAGGACAAGAAGACTCAGCTCAGAACATAGCTGGGCTAAAGCAAC
TGTCCAGGCTGCTTAAAATTCGAGGCTCACACTCAGTGACTTTAATGGGA
GACAAAGCTGAGACCCCCCACCCCACCACAAATCAGAGCGTTTGCAAAAG
CTTTAGGATCATGGTGGCTCTACAGCTTAGGTGTGAGGGAGAAATCCACT
CACTAGACGATGCCCTGTCTTCTAGGTTCCCATGCACCCCTTAAGGACAG
GTTCATCTCACAGACAGGAATACTTTGATATCATTTCCCGTGTCAGAGGC
CTCACCGGTCACTATTACCCCCTGTGGAGATGCCCTCCTCACGTAATCCC
GCCTCCCCAGCTCTTCCCACGGCTTATTTCTCCCATTTCCTTATTGTGCC
CGCCCTCTGTGCACATTCTGTTCACCCTCCCG

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTCTTTAGACCATGCTGCCCTCA
AACTCAGAAATCTGCCTGCCTCTGCCTCTGCCTCCCAAGTGCTGGGATTA
AAGGCGTGCTCCACCATTGCCCAGCTTAAGTACACCCTCTTACACTAAGC
TGTACATTCAACCTTATCGCTAATGTTTCCAGCAAGCTTAGGAGTTCAGT
ATTATTGAGTTATAATTAGGAATAAGTACACTAACTTAATAGCTAAAATT
TGAGATTGTCTGTTCCTTAAGTTCACATCTATACAAGTGTGCCAGCTCAG
GCCCCATTTTGGTTAGATCTTTTTTATTTAGGTTTGTCTTTTATTTACTT
TTTCTCCCTTCTTTATATGAGCCCCCCCCCATTGAAACCAGCCTTCTTCT
AAAGAGTTTATTTGAAAGCATTTTTTTCTTCTTAGTCTTTACATTGAGAC
AGAATTTATTGTTTTCTAGTTCCTTCTGTGATTGACTCAGTTTCATTTGA
CTCTAGAGGACTGGTTTTCAACCTGTGGCTTGCAATCACTTTGATCACCT
ACCACCCTTGGAAACACAGACATCTACTTTATGACCCATACACAGTAAAA
CTACCGCCCACGACGGTAGCACCCCCACTAATCTTTAAACGTTAGGGGTC
TACCCTCCTCGAGGAACTCGTGTATACACAATCGGATCTGTG

Query= MSMg01no151_a12.b1 MSMg01no151_a12.b1 CHROMAT_FILE:
MSMg01no151_a12.b1 PHD_FILE: MSMg01no151_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:44 2005
         (274 letters)



>mm_chr17_3336765_3337438
          Length = 674

 Score =  509 bits (263), Expect = e-149
 Identities = 269/271 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattccacttctactgggatggccgtcaaaagtttactgtctcccgcagggagccggct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gaattccacttctactgggatggccgtcaaaagtttactgtctcccgcagggagccggct 415

                                                                       
Query: 64  ggtttttagtgacttggcctgatatcaaaatagctgcaattaaatggatttgtgagggtc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggtttttagtgacttggcctgatatcaaaatagctgcaattaaatggatttgtgagggtc 355

                                                                       
Query: 124 agatgagatattcaaacagagggtactccccatggaactaaaatcatgcttagcacatgt 183
           |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 354 agatgagatactcaaacagagggtactccccatggaactaaaatcatgcttagtacatgt 295

                                                                       
Query: 184 tcaagttacatatgccgcccagggcaaatggctgtgagacacaaagtaggtcaacgtaac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tcaagttacatatgccgcccagggcaaatggctgtgagacacaaagtaggtcaacgtaac 235

                                          
Query: 244 tccctgcggtgctcactaggacaagaagact 274
           |||||||||||||||||||||||||||||||
Sbjct: 234 tccctgcggtgctcactaggacaagaagact 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space:   176225
Effective search space used:   176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no151_a12.g1 MSMg01no151_a12.g1 CHROMAT_FILE:
MSMg01no151_a12.g1 PHD_FILE: MSMg01no151_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:45 2005
         (412 letters)



>mm_chr17_3186287_3187095
          Length = 809

 Score =  659 bits (341), Expect = 0.0
 Identities = 390/421 (92%), Gaps = 27/421 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctttagaccatgctgccctcaaactcagaaatctgcctgcctctgcctctgcctccc 60
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||      ||
Sbjct: 207 actctttagaccaggctgccctcaaactcagaaatctacctgcctctgcctc------cc 260

                                                                       
Query: 61  aagtgctgggattaaaggcgtgctccaccattgcccagcttaagtacaccctcttacact 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgctgggattaaaggcgtgcgccaccattgcccagcttaagtacaccctcttacact 320

                                                                       
Query: 121 aagctgtacattcaaccttatcgctaatgtttccagcaagcttaggagttcagtattatt 180
           |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||
Sbjct: 321 aagctgtacattcaaccttatcgctaatgtttccagcaagcttag---ttcagtattatt 377

                                                                       
Query: 181 gagttataattaggaataagtacactaacttaatagctaaaatttgagattgtctgttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gagttataattaggaataagtacactaacttaatagctaaaatttgagattgtctgttcc 437

                                                                       
Query: 241 ttaagttcacatctatacaagtgtgccagctcaggccccattttggttagatctttttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttaagttcacatctatacaagtgtgccagctcaggccccattttggttagatctttttta 497

                                                                       
Query: 301 tttaggtttgtcttttatttactttttctcccttctttatatgagcccccccc------- 353
           |||||||||||||||||||||||||||||||||||||||||| |                
Sbjct: 498 tttaggtttgtcttttatttactttttctcccttctttatatta---------ttttttt 548

                                                                       
Query: 354 c--attgaaaccagccttcttctaaagagtttatttgaaagcatttttttcttcttagtc 411
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cttattgaaaccagccttcttctaaagagtttatttgaaagcatttttttcttcttagtc 608

            
Query: 412 t 412
           |
Sbjct: 609 t 609


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 809
Length adjustment: 9
Effective length of query: 403
Effective length of database: 800
Effective search space:   322400
Effective search space used:   322400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)