Query= MSMg01no154_c13.b1 MSMg01no154_c13.b1 CHROMAT_FILE:
MSMg01no154_c13.b1 PHD_FILE: MSMg01no154_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:43 2005
(441 letters)
>mm_chr17_72457692_72458532
Length = 841
Score = 814 bits (421), Expect = 0.0
Identities = 436/441 (98%)
Strand = Plus / Minus
Query: 1 cgacagatgctctattgactggtcaagtggcattatcatgaggattattataatggagga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cgacagatgctctatttactggtcaagtggcattatcatgaggattattataatggagga 582
Query: 61 ggaagaaattcatgccagaggagagggagggcaggcacagtttgggtttgtcgttagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggaagaaattcatgccagaggagagggagggcaggcacagtttgggtttgtcgttagtga 522
Query: 121 tcttaggtatgcttcagtgtacctaggagaccacttgctgtggagagttgaatgatataa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 521 tcttaggtatgcttcagtgtacctaggagaccacttgctgcggagagttgaatgatataa 462
Query: 181 ccagtaagttccagagaaggagtcggacatctgcttctcaattagtgttaatttagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ccagtaagttccagagaaggagtcggacatctgcttctcaattagtgttaatttagcttg 402
Query: 241 tttgcaaatgatttgtgcctccgtaagacagcataactaaaagttggtttctttcctatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tttgcaaatgatttgtgcctccgtaagacagcataactaaaagttggtttctttcctatg 342
Query: 301 actataaggttttaccaacctcacaatgggtccagatggatggagcagaggcgcgtggct 360
||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 341 actataaggttttactagcctcacaatgggtccagatggatggagcagaggggcgtggct 282
Query: 361 gagctgcagaggaaggagagagatttctgtttttgccaatgtctggaaggatatcatgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagctgcagaggaaggagagagatttctgtttttgccaatgtctggaaggatatcatgcc 222
Query: 421 ctctgaagctcagtacaccca 441
|||||||||||||||||||||
Sbjct: 221 ctctgaagctcagtacaccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_c13.g1 MSMg01no154_c13.g1 CHROMAT_FILE:
MSMg01no154_c13.g1 PHD_FILE: MSMg01no154_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:43 2005
(504 letters)
>mm_chr17_72282835_72283736
Length = 902
Score = 868 bits (449), Expect = 0.0
Identities = 492/511 (96%), Gaps = 10/511 (1%)
Strand = Plus / Plus
Query: 1 aattccaggtggttgtgagctgcctaacatggacgtagggaaacagaccccagttcaagt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 aattccaggtggttgtgagctgcctaacatggatgtagggaaacagaccccagttcaagt 260
Query: 61 gctctgaactcctaaaccatctcttcagacctctcgtaggttttatgcatctccctgcgc 120
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gctctgaactcctaaagcatctcttcagacctctggtaggttttatgcatctccctgcgc 320
Query: 121 tggccagaaggtttttaaacacagcactctttccttttagcccttcttcagtctcccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggccagaaggtttttaaacacagcactctttccttttagcccttcttcagtctcccttt 380
Query: 181 tgtaggtgcttaattaatttaatgtgcatattcttcctcattttgaatttttttcagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tgtaggtgcttaattaatttaatgtgcatattcttcctcattttgaatttttt-cagtta 439
Query: 241 tttttattgtctgattctcaggtttaagttgattttgtagaaataggaaagagggaagcg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttttattgtctgaatctcaggtttaagttgattttgtagaaataggaaagagggaagcg 499
Query: 301 ctggggaaggggaagaaggcagagaagaaaattaacttttttttttgatattgatactct 360
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 ctggggaaggggaagaaggcagagaagaaaattaactttttttt--gatattgatactct 557
Query: 361 tgccccatagttcgtaacaatatactgctttattttcttatgatataacacattagtatt 420
|||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 558 tgccccataggtcttaacaatatactgctttattttcttatgatataacacactagtatt 617
Query: 421 tttgaaagctaacaatctaatttcccttttaggtggccaaaggttttttt-------ctt 473
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 618 tttgaaagctaacaatctaatttcccctttaggtggccaaaggttttttttcttcttctt 677
Query: 474 cttctttaaagcccagcaatttcacaagaat 504
||||||||||||||| |||||||||||||||
Sbjct: 678 cttctttaaagcccatcaatttcacaagaat 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 902
Length adjustment: 10
Effective length of query: 494
Effective length of database: 892
Effective search space: 440648
Effective search space used: 440648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
