Query= MSMg01no160_p16.b1 MSMg01no160_p16.b1 CHROMAT_FILE:
MSMg01no160_p16.b1 PHD_FILE: MSMg01no160_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:05 2005
(311 letters)
>mm_chr17_61191385_61192095
Length = 711
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttctcagccctgcccaaagctttactggtgcatgatccatattgcacattttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttctcagccctgcccaaagctttactggtgcatgatccatattgcacattttc 263
Query: 64 ataggcatcataggaattgcttctataagtcatcttggaactgctcttcctcaaatctcc 123
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 264 ataggcatcataggaattgcttctataagacatcttggaactcctcttcctcaaatctcc 323
Query: 124 tgattgttctctcggtgtccagtgatacactgctctctttaaccaaatccaccatctgga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgattgttctctcggtgtccagtgatacactgctctctttaaccaaatccaccatctgga 383
Query: 184 cacaagccaatgaaacatggtttaaccttacgctaaattagttaatttaagttttgttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacaagccaatgaaacatggtttaaccttacgctaaattagttaatttaagttttgttcc 443
Query: 244 aactatttactgtttgaacattatcataaaatggagttacttcaaataaagctttatttc 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aactatttactgtttgaacatcatcataaaatggagttacttcaaataaagctttatttc 503
Query: 304 ttaattat 311
||||||||
Sbjct: 504 ttaattat 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_p16.g1 MSMg01no160_p16.g1 CHROMAT_FILE:
MSMg01no160_p16.g1 PHD_FILE: MSMg01no160_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:05 2005
(190 letters)
>mm_chr17_61356427_61357017
Length = 591
Score = 354 bits (183), Expect = e-102
Identities = 189/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Minus
Query: 1 actggagagggctagcagactttccttccctttgaatctgtgttgtgcggtgtgattaat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 391 actggagagggctagcagactttccttccctttgaatctgtgttgcgcggtgtgattaat 332
Query: 61 gctatgttgatgtttaaagaggcagcgtcatta-aagaaaatgagatgagaaaaaagcat 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 331 gctatgttgatgtttaaagaggcagcgtcattagaagaaaatgagatgagaaaaaagcat 272
Query: 120 gtttcctgcccagtaagtcctaagtatgctgtgtcatcatatgggttttacttctgctta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtttcctgcccagtaagtcctaagtatgctgtgtcatcatatgggttttacttctgctta 212
Query: 180 gagaacagttt 190
|||||||||||
Sbjct: 211 gagaacagttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 591
Length adjustment: 8
Effective length of query: 182
Effective length of database: 583
Effective search space: 106106
Effective search space used: 106106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
