Query= MSMg01no164_e14.b1 MSMg01no164_e14.b1 CHROMAT_FILE:
MSMg01no164_e14.b1 PHD_FILE: MSMg01no164_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:06 2005
(316 letters)
>mm_chr17_7975050_7975765
Length = 716
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Minus
Query: 5 gaattccttgcttctcaggctatggttagggaaagcaagaatggagattcccctctttat 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattccttgcttctcaggctatgattagggaaagcaagaatggagattcccctctttat 455
Query: 65 gcagacaaaataatcacttagtgttctattcatctcatcttacctaaattaagcatgaac 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gcagacaaaataatcacttagcgttctattcatctcatcttacctaaattaagcatgaac 395
Query: 125 aactaaaagttgggcagggcttggctggaggaagtcagtgcagagcctgtggtaaaaggg 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aattaaaagttgggcagggcttggctggaggaagtcagtgcagagcctgtggtaaaaggg 335
Query: 185 accccttttgtgcatccactgtcattgcagaagaggatgagctggacgtgcctgaagaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 accccttttgtgcatccactgtcattgcagaagaggatgagctggacgtgcctgaagaca 275
Query: 245 ttagtgtccgggtcatgtcgtctcagtccgtgctcgtggcctgggtggatcctcttgtgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttagtgtccgggtcatgtcgtctcagtccgtgctcgtggcctgggtggatcctcttgtgg 215
Query: 305 aaaaacagaa 314
||||||||||
Sbjct: 214 aaaaacagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_e14.g1 MSMg01no164_e14.g1 CHROMAT_FILE:
MSMg01no164_e14.g1 PHD_FILE: MSMg01no164_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:06 2005
(416 letters)
>mm_chr17_7882053_7882869
Length = 817
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 1 ctttgatgtgaatcttatgtgtccaggaaaagtcggggacagaaattcacccaaatccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgatgtgaatcttatgtgtccaggaaaagtcggggacagaaattcacccaaatccag 260
Query: 61 aaatatttccaaagacattccccagggtgtgttcaattaagatgttatgttagagccttc 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aaatatttccaaagacgttccccagggtgtgttcaattaagatgttatgttagaaccttc 320
Query: 121 tgcaaattccattatactctgcactcttgcctggaaatgccgaaagggtagtcagaggag 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tgcaaattccattatactctgcactcttgtctggaaatgccgaaagggtagtcagaggag 380
Query: 181 ctgtggtggcaagtaaaccagggaggtggggacagtgggccggagggacagatggactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtggtggcaagtaaaccagggaggtggggacagtgggccggagggacagatggactct 440
Query: 241 gggggggggga-cagaagctgcttcctaagccaatgcttagccttcatcccacagaatgt 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggggggggaacagaagctgcttcctaagccaatgcttagccttcatcccacagaatgt 500
Query: 300 ctggaagaggaaaatcatcaattcagtgacaggcacccggaacatcctttacaaagggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggaagaggaaaatcatcaattcagtgacaggcacccggaacatcctttacaaagggag 560
Query: 360 gcttaaggagggaagccatctcgtggggagagaagggcatgaggtgtggtgcaggtg 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttaaggagggaagccatctcgtggggagagaagggcatgaggtgtggtgcaggtg 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 817
Length adjustment: 9
Effective length of query: 407
Effective length of database: 808
Effective search space: 328856
Effective search space used: 328856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
