NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTACCTAAAAGCTAAGATTGAAAAAATTTTATATTAGTCT
CTGCCCACACTGGGCCAGGTGGAGGCCACCACATCTGTCCCTCTGGAAGG
TCTTCAGGGACAACACATTTGGAGTTACTATTTCTGATGACCAGGCCAGG
TCGTCTTCCTTAATAATCTTGAGTTATCTATCTATTGCTGTTCAGTTGGC
TGCATAGCCCTTGGGAGCTCTGAGGAGTCCGGGTTAGTTGGAATTGTTGT
TCTTCCTATGGGGTTGCAATCCCCTAACTCTTCCCCAGGGGTCCCCAACC
TCAATTTAATTGTTCGAATTAGGCATATATGCTAAAACAATGACAAAAAG
TGCAGTATGGTAACATAGCCATTTATTGTGATTTCAAGTATTGTTATTTT
AAATAATTGCATGTGTCACCTTTATACACCTAACTGTGCATCACCATGCA
ACATTATGAAGACAAAATACTTTGCACCACATTAGGATGTGTGCAATATG
GCTGGAATTAATCAGGTCCCCTGTAATCTATGGGCCTGCTGTCACCCAGG
AGCTCCCACATTCACTAAAACACTATGAGGTATAGGAGTGTATTTGCTAT
GAGTGCATGGTGTAGAGGGTGTTAGCTGTGAGTTGCAATGACTAACACTG
CTG

NAAAATCTNNNNNAAAGATGCAGCCGCCGGCGCCGGNCGCCCAXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACACCCGAGGAATACCCAATGGNT
GAGAAGCACCTGATTAAATGTTCCACATCCTAATGANTCGGGAAATGAAA
ANTCAAANAACCCCTGACATTCCCCCTACACCAGTCAGAATGGCTAAGAA
TCAAAATTCAGGTGACAGGAGATGGTGGCTAGGATGTGGAGAAAGAGGAA
CACTCCTCCTTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAGT
CAGTCTGGTGGTTCCTCAAAAAATTTGACATAGTACTACTGGAAGATCCA
GCAATACCTCTCCTGGGCATATACCCAAAAGATGTTCCCACTGATAATAA
GAACACATGCCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCCAG
AAGCTGGAAAGAACCCAGATGTCCCCTCACCAGAGGAATGGATACCGAAA
ATGTGGCACATTTACCACATGAAGTACTACTCAGCTATTAAAAACAATGA
ATTTATGAAATTCTTGTGCAAATGGATGTATCTGGAGGATATCATCCTTA
GTGAGGTAACCCCAATCACAAAAAGCCATTAGATATGCCACTCACGATAA
GCGGATATTTTTCCCGAAACCTACAATACCCAAGATACCATTTGCCAAAC
CACAGAAAATCAAGAAGAAGGAAGACCCATGTGTGGACCCTTTATTCCCT
CCCTAGAATAGGGAACCAAATACCCCTGAAAGGAGTTACCAAGTTTGGAG
CCAACACCAAAGGATGGATTATCCCGAGACTACCCCCCCCTGGGCATCCT
CCCCATAATCCGCCCCCCAACCCCGACACTATTGTATATGCCCTCCAGGG
TTTGGCCGAACCGACCCCCGACATACCCTTTGCCCCAAGCAGGCTCTCAC
CCTGCCCCGGCCAAACCCCCCAACTGGCATGCCCCCCCCCCCTCCCTCCT
CGCAAGGGCACACCGCCCCCCCCCCCCTGCCCCCACACCTCCCACCAAAA
CGCCCCTCCCCCCGACCTCTCTACACGGTCTCCTCCCCCCCCCCCTCCAC
TGCGGGGCCACCCACCCCTCTTCTCACCCCTCCCCTCCACTCTTCC

Query= MSMg01no165_a04.b1 MSMg01no165_a04.b1 CHROMAT_FILE:
MSMg01no165_a04.b1 PHD_FILE: MSMg01no165_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:01 2005
         (622 letters)



>mm_chr17_69967686_69968707
          Length = 1022

 Score = 1156 bits (598), Expect = 0.0
 Identities = 613/618 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttacctaaaagctaagattgaaaaaattttatattagtctctgcccacactgg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttacctaaaagctaagattgaaaaaattttatattagtctctgcccacactgg 264

                                                                       
Query: 65  gccaggtggaggccaccacatctgtccctctggaaggtcttcagggacaacacatttgga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccaggtggaggccaccacatctgtccctctggaaggtcttcagggacaacacatttgga 324

                                                                       
Query: 125 gttactatttctgatgaccaggccaggtcgtcttccttaataatcttgagttatctatct 184
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttattatttctgatgaccaggccaggtcgtcttccttaataatcttgagttatctatct 384

                                                                       
Query: 185 attgctgttcagttggctgcatagcccttgggagctctgaggagtccgggttagttggaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attgctgttcagttggctgcatagcccttgggagctctgaggagtccgggttagttggaa 444

                                                                       
Query: 245 ttgttgttcttcctatggggttgcaatcccctaactcttccccaggggtccccaacctca 304
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 ttgttgttcttcctatggggttgcaatcccctaactcttccacaggggtccccaacctca 504

                                                                       
Query: 305 atttaattgttcgaattaggcatatatgctaaaacaatgacaaaaagtgcagtatggtaa 364
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttaattgttagaattaggcatatatgctaaaacaatgacaaaaagtgcagtatggtaa 564

                                                                       
Query: 365 catagccatttattgtgatttcaagtattgttattttaaataattgcatgtgtcaccttt 424
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 catagccatttattgtgatttcaaatattgttattttaaataattgcatgtgtcaccttt 624

                                                                       
Query: 425 atacacctaactgtgcatcaccatgcaacattatgaagacaaaatactttgcaccacatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atacacctaactgtgcatcaccatgcaacattatgaagacaaaatactttgcaccacatt 684

                                                                       
Query: 485 aggatgtgtgcaatatggctggaattaatcaggtcccctgtaatctatgggcctgctgtc 544
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggatgtgtgcaagatggctggaattaatcaggtcccctgtaatctatgggcctgctgtc 744

                                                                       
Query: 545 acccaggagctcccacattcactaaaacactatgaggtataggagtgtatttgctatgag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acccaggagctcccacattcactaaaacactatgaggtataggagtgtatttgctatgag 804

                             
Query: 605 tgcatggtgtagagggtg 622
           ||||||||||||||||||
Sbjct: 805 tgcatggtgtagagggtg 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)