Query= MSMg01no169_d22.b1 MSMg01no169_d22.b1 CHROMAT_FILE:
MSMg01no169_d22.b1 PHD_FILE: MSMg01no169_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:53 2005
(312 letters)
>mm_chr17_72400715_72401427
Length = 713
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgaagaat-aattgcctgggctatggcatacttgctaatgttcagaattagt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattctttgaagaattaattgcctgggctatggcatacttgctaatgttcggaattagt 264
Query: 64 tcctgatcaccatagaccttgcattcaatctaaacgcaattactgatgtaaacaagacag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctgatcaccatagaccttgcattcaatctaaacgcaattactgatgtaaacaagacag 324
Query: 124 gcgatggaagagagagagggggcaaaaccagatttggataccttcactgcagttcttcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcgatggaagagagagagggggcaaaaccagatttggataccttcactgcagttcttcag 384
Query: 184 ggcaaagaaatccaccgccgacaagctccggttgccactggagatgtattccagagccac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcaaagaaatccaccgccgacaagctccggttgccactggagatgtattccagagccac 444
Query: 244 tcgaaatgggtttgctgggcgcccgactctcccctgcagcactgtccagctggagacatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcgaaatgggtttgctgggcgcccgactctcccctgcagcactgtccagctggagacatc 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_d22.g1 MSMg01no169_d22.g1 CHROMAT_FILE:
MSMg01no169_d22.g1 PHD_FILE: MSMg01no169_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:53 2005
(103 letters)
>mm_chr17_72552755_72553257
Length = 503
Score = 178 bits (92), Expect = 8e-50
Identities = 101/104 (97%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 1 ctactttgcacatgagaacatgtacaatgatagaggcaata-aaattagttatctgatct 59
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 303 ctactttgcacatgagaacatgtacaatgatagaggcaatagaaa-tagttatctgatct 245
Query: 60 agataccatgcccatcccctagtttgtgggctctccaggaaagc 103
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 244 agataccatgcccatcccctagtttgtggtctctccaggaaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
