Query= MSMg01no170_f02.b1 MSMg01no170_f02.b1 CHROMAT_FILE:
MSMg01no170_f02.b1 PHD_FILE: MSMg01no170_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:14 2005
(315 letters)
>mm_chr17_73328078_73328792
Length = 715
Score = 571 bits (295), Expect = e-167
Identities = 307/311 (98%)
Strand = Plus / Minus
Query: 4 ggaattcaccattactcacatggagcagatgctgatttcccagctgggtaccgccgttga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattcaccattactcacatggagcagatgctgatttcccagctgggtaccgccgttga 455
Query: 64 aatctgtaatgagaataggatgcactcttaagtcagatgaggctcagcacctgggcaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aatctgtaatgagaataggatgcactcttaagtcagatgaggctcagcacctgggcaagg 395
Query: 124 aaaacacagctttgtgagaacgagtgaacggatcaggtacaagtctaaacaggtgactca 183
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aaaacacagcttcgtgagaaggagtgaacggatcaggtacaagtctaaacaggtgactca 335
Query: 184 ttcatatggtgagcatctgcttggctccagactctgggaagacaaggtgggcaagaccaa 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttcatatggcgagcatctgcttggctccagactctgggaagacaaggtgggcaagaccaa 275
Query: 244 tgcactagctgtgctcacggagacctcaagacagcaactcccaaagcagaaataagtgcc 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 tgcactagctgtgctcacggagacctcaagccagcaactcccaaagcagaaataagtgcc 215
Query: 304 aggatgaaggg 314
|||||||||||
Sbjct: 214 aggatgaaggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_f02.g1 MSMg01no170_f02.g1 CHROMAT_FILE:
MSMg01no170_f02.g1 PHD_FILE: MSMg01no170_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:14 2005
(285 letters)
>mm_chr17_73194752_73195435
Length = 684
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1 agggcttcctgtttgttagtcaagtgctccaccaatgaactattttccccgccctttctt 60
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 201 agggcttcctgtttgttagtcaagtgctccaccaatgaactatattcccagccctttctt 260
Query: 61 gtttttaaattgcaagttcatctgtccttatctgatcacccctttacctctgagtctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttttaaattgcaagttcatctgtccttatctgatcacccctttacctctgagtctttc 320
Query: 121 ctcaaattacatatcatctgctcacttagcagtggtgctatgctggcttttttttttcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ctcaaattacatatcatctgctcacttagcagtggtgctatgctggcttttttttt-caa 379
Query: 181 gcttctgtatgtgggttttttacctgaatgcaggcctgtgtctttggagggcataggatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcttctgtatgtgggttttttacctgaatgcaggcctgtgtctttggagggcataggatc 439
Query: 241 ccctgtaactagagttacagtttagtaacagttgagtcttcatat 285
||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccctgcaactagagttacagtttagtaacagttgagtcttcatat 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
