Query= MSMg01no174_d19.b1 MSMg01no174_d19.b1 CHROMAT_FILE:
MSMg01no174_d19.b1 PHD_FILE: MSMg01no174_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:03 2005
(321 letters)
>mm_chr17_49376937_49377657
Length = 721
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%)
Strand = Plus / Minus
Query: 4 ggaattctccaaggtcattgctattatcactgatcaggagttcatcctgggagaattcgg 63
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 521 ggaattctccaaggtcattgctattatcactgatcaggagttcgtcctgggagaattcgg 462
Query: 64 gctgtgctgatttaagaaccaagcccagagccagtgccatgggggcaaatgtttatcctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gctgtgctgatttaagaaccaagcccagagccagtgccatgggggcaaatgtttatcctg 402
Query: 124 atgaagagaacaggcaagagtccagcctcttctcccatagtcaggccagagcttatttaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atgaagagaacaggcaagagtccagcctcttctcccatagtcaggccagagcttatttaa 342
Query: 184 gaggagcagaagttaaaagtgcaagaggaacatttgcttgtttaattgaccatagatttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaggagcagaagttaaaagtgcaagaggaacatttgcttgtttaattgaccatagatttt 282
Query: 244 cctggcgataatttgcagtgagatacaggactttttcaaggtcatgggtctgggcatagc 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 281 cctggtgataatttgcagtgagatacaggactttttcaaggtcatgggtctggacatagc 222
Query: 304 tggaagaggaaaatggct 321
||||||||| ||||||||
Sbjct: 221 tggaagagggaaatggct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_d19.g1 MSMg01no174_d19.g1 CHROMAT_FILE:
MSMg01no174_d19.g1 PHD_FILE: MSMg01no174_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:03 2005
(234 letters)
>mm_chr17_49257979_49258612
Length = 634
Score = 422 bits (218), Expect = e-122
Identities = 231/236 (97%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 gttctgcacaccactggcattttaaaacactcccaacctgtcatcttttatgatctccca 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttctgcacaccaatggcattttaaaacactcccaacctgtcatcttttatgatctccca 260
Query: 61 cagtctggatggacctagtgtctcttgtgggtgacaatcagttaatgtgcttttagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtctggatggacctagtgtctcttgtgggtgacaatcagttaatgtgcttttagaaaa 320
Query: 121 agtttattgatggattgtgtgtgtgcatgaatgcaagtgtgatttgtgtgtgtgtg--ca 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 agtttattgatggattgtgtgtgtgcatgaatgcaagtgtgatttgtgtgtgtgtgtgca 380
Query: 179 tgtgtgtgtgtatgtgtgtagtatgtgcacacacacttgtgtgtatacattatgta 234
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 381 tgtgtgtgtgtatgtgtgtagtatgtgcatacacacttatgtgtatacattatgta 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
