Query= MSMg01no178_c21.b1 MSMg01no178_c21.b1 CHROMAT_FILE:
MSMg01no178_c21.b1 PHD_FILE: MSMg01no178_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:55 2005
(553 letters)
>mm_chr17_85087287_85088239
Length = 953
Score = 1031 bits (533), Expect = 0.0
Identities = 545/549 (99%)
Strand = Plus / Plus
Query: 5 gaattccttaactgcttcgaactgctcagtaaaacagacaatagtacccacaccatatgc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttaactgctttgaactgctcagtaaaacagacaatagtacccacaccatatgc 264
Query: 65 ttgcaatgaacagtacatggataatgatataacgtgattattgtaatggcttgcagctgg 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgcaatgaacagtagatggataatgatataacgtgattattgtaatggcttgcagctgg 324
Query: 125 taaacacttgctggcttttttttttcctgatatttcacatgctttctggtcacccaccct 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 taaacacttgctggcttttttttttcctgatatttcacatgctttctggccacccaccct 384
Query: 185 cttagctctagacttgaacaggatggtggggtctcgctgccatgtttggtaggactgtgg 244
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcagctctagacttgaacaggatggtggggtctcgctgccatgtttggtaggactgtgg 444
Query: 245 tgtgggatgcctcaagatctcttatgcatcagtatcgatcggggtgtctcctgtgagagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtgggatgcctcaagatctcttatgcatcagtatcgatcggggtgtctcctgtgagagg 504
Query: 305 agttatacaaaatgcagtagacgctgctgaagccctctgaatggttcagtttcccaaggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agttatacaaaatgcagtagacgctgctgaagccctctgaatggttcagtttcccaaggg 564
Query: 365 ctcgctaacctctccccacaggtggacatcgcctctcaggtgccttggtttgagcagctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcgctaacctctccccacaggtggacatcgcctctcaggtgccttggtttgagcagctg 624
Query: 425 gctcagttcaagataccctggaggtctcatagcagccaagactcctgtgagctgggcatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctcagttcaagataccctggaggtctcatagcagccaagactcctgtgagctgggcatc 684
Query: 485 cgaaatctaagcttcaaagtgaggagtggacagatgctggccatcatagggagctcaggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cgaaatctaagcttcaaagtgaggagtggacagatgctggccatcatagggagctcaggt 744
Query: 545 accaacaga 553
|||||||||
Sbjct: 745 accaacaga 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_c21.g1 MSMg01no178_c21.g1 CHROMAT_FILE:
MSMg01no178_c21.g1 PHD_FILE: MSMg01no178_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:55 2005
(602 letters)
>mm_chr17_85223460_85224465
Length = 1006
Score = 739 bits (382), Expect = 0.0
Identities = 400/408 (98%), Gaps = 4/408 (0%)
Strand = Plus / Minus
Query: 199 gggaggaagtgtgcaaagacggcggtccagttcattacaagtgtgtaggaat----aaca 254
|||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 543 gggaggaagtgtgcaaagacggcggtccagttcattacaagtatgtaggaataacaaaca 484
Query: 255 gctcaagagtgtctgtggtgtcactgtgaactcagcaacaggtcaagaaggagacatctt 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gctcaagagtgtctgtggtgtcactgtgaactcagcaacaggtcaagaaggagacatctt 424
Query: 315 tttatcctttcaaaggtacattatgggggctggcgagatagcttagtgggtaaaggcact 374
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 423 tttatcctttcaaaggtacattatgggggctggtgagatggcttagtgggtaaaggcact 364
Query: 375 tggccacccaaccctgacgacctgagtttgattccatgtggtgatcctctgacctcctca 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tggccacccaaccctgacgacctgagtttgattccatgtggtgatcctctgacctcctca 304
Query: 435 agtgtgtcggagatgtgtagaccctccctacaaacataagtaaataaatagataaatata 494
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 303 agtgtgtcggagatgtgtagaccctccctataaacataagtaaataaatagataaatata 244
Query: 495 aactttaaacatacagttatggatttataatgtcattttactgggttttctctttatgtt 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aactttaaacatacagttatggatttataatgtcattttactgggttttctctttatgtt 184
Query: 555 gtattacatattcttatttatagcttttgggactatgagtgggcccag 602
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtattacatattcttatttatagcttttgggactatgagtgggcccag 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1006
Length adjustment: 10
Effective length of query: 592
Effective length of database: 996
Effective search space: 589632
Effective search space used: 589632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
