Query= MSMg01no182_o20.b1 MSMg01no182_o20.b1 CHROMAT_FILE:
MSMg01no182_o20.b1 PHD_FILE: MSMg01no182_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:48 2005
(367 letters)
>mm_chr17_83160542_83161307
Length = 766
Score = 561 bits (290), Expect = e-164
Identities = 341/358 (95%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtgtgcttgtaactacatgcataagtccaacaaggccaacccagacaaagtaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgtggttgtaactacatgcataagtccaacaaggccaacccagacaaagtaa 264
Query: 65 gcccccagctaagaatagaattatggaaatgaattctcttgctaatcttaggaggaaggc 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 gcccccagctaagaatagaattatggaaatgaattctcttggtaatcttaggaggaaggc 324
Query: 125 atccacgttgccacagtgtgatggaatgtgttcaatgacacaattatgggagaaaaacta 184
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 atccatgttgccacagtgtgatggaatgtgttcgatgacacaattatgggagaaaaacta 384
Query: 185 gaaatcctaagaagggattaagattgtaaaaataaataaatagagataaagatggcatat 244
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 gaaatcctaggaagggattaagattgtaaaaagaaataaatagagataaagatggcatat 444
Query: 245 atatcaaaaatatatgtatagatatatagag-agtgaattagattggtttgcatgataca 303
|||||| | ||||||||||||| ||||| || ||| |||||||||| |||||||||||||
Sbjct: 445 atatcacatatatatgtatagacatata-aggagtaaattagattg-tttgcatgataca 502
Query: 304 tgaggctagtccgaccatggttgcctgaactctagaaagactaagaaaacagtagctg 361
||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 503 tgaagctagtccaacaatggttgtctgaactctagaaagactaagaaaacagtagctg 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_o20.g1 MSMg01no182_o20.g1 CHROMAT_FILE:
MSMg01no182_o20.g1 PHD_FILE: MSMg01no182_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:48 2005
(289 letters)
>mm_chr17_83304791_83305479
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 tctaaggcagaatgtctgcctcctggatatttattgcactgaacagcccggttattattt 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 tctaaggcagaatgtctgcctcctggatatttattgcactgaacagcagggttattattt 426
Query: 61 cctataatctctgaaatacctttcagttacatgttgatcagagttgctgtcttgccaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cctataatctctgaaatacctttcagttacatgttgatcagagttgctgtcttgccaaaa 366
Query: 121 acaatgagggagcctggcatcctaggaagagaatgcctagtgattacacgatcctgtgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acaatgagggagcctggcatcctaggaagagaatgcctagtgattacacgatcctgtgag 306
Query: 181 ctcatcctagagaagatgtataaaactcagcctgctctgtctgtcccaccagcgttaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctcatcctagagaagatgtataaaactcagcctgctctgtctgtcccaccagcgttaggt 246
Query: 241 tacagagttacagaaagcagccacagttgcttgggcacgatgtga 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tacagagttacagaaagcagccacagttgcttgggcacgatgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
