TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTCTTCATAAGGTGTTTCCCAGCATATCCATATCCCTACCTAGAA
CTTTATAGGATGAATGACTAACAAAGGAACAAGTGGGTTGTGTGTGTTCA
TATGCATACATGTGTGTATATACATATATAAGGCATCAGCACACTTTTAT
TGAAAACTACAATGTGAAAATTGTCAATACAAACTGTTGGTCTTTTGAAG
GGTGACCCTAGATGTCTGTTTGCTCTGGGACAATTCATGTACCGTTTTTA
TGACTTAGCTCCCTTGATAGTACAACCTACCCATGGGAATTTAGAAGAGC
AGAGGAATTTAAATGATTGTTCTGCCCCCACTCACAGGCATTAGAGCAAC
CACTCTGGCTCTCTGCCCAACTTACTTGTAGGAATGGAGCTGAACTTCTC
TTAGTAATATAACCATAGGATAGGGGTCACAATGTCACCATCTTTACAAT
CAGGTTCTTCTGCCCCAGAGGGATACCATCCTCTGGGCCTCTCTTTTCCC
AGAGGTTTAACCTCACCCATTAGGCTTGAACCCCTGATCATGGAAAGTAT
GTGGGAGCATTCTCTCCAGTCGGGAAATATCCCCAAGTCATCGGACCATG
TTTTGATTGACTGCAAGGCAACACCTTGGGTTTGTGGCATGATAGATGTG
ACTTTTAGGATAGAAAGCAN

TGTGGGAGGCCTGGAGGCCGCCTGTTTCCCAACGCGAGGNGAACNANAGA
AGGTTACAGGACGGGAGGNAAGCTNANNGGGNAGCACTGGNAGCANNANT
TNNCAATTTTATTTCGATAATCAAATTTTAAATTTAACTCAGAAGTGACT
TTCAGATTATCACATTCATTAGTAACAAGATTCCTTTATGGAAATTAGTT
TTGAAACCATAGTAATGAATTGTGAAGATGATTTTTATTTTATTGTTTTT
TTATGGGGACAGAAGACATTTACTCTTTATAAATCAAATACGCCAACTTG
CTTTTAGCTAATTTGGTGTTTTTTCACCCNGACTAACAGCACCAAATAAA
ATCTGAGTCTGCCGCCCAATGTTCAGAATAGCTAACTTTTTGATATTAGC
GCTTTAACAAGCTCTGTGAGATGGGTGGTGATATTCTCTACTAAAAGAAA
AGGAAACTATGATTGCTACACTTAGAAATTACACTGCGCATGCGGATAAG
ATTAAAAGCAGCAGTAAGTGACTGGAAAACTAGTTCTTTTCATAAACCTC
TATTGAGAAACTACTACTTACCAGGTTACTCCAGTGCTACAACAGCATAC
AGCCAAGACTTTTACTCACTAATACCCGTGAGAACAGACCACAGATAGAA
TTGATTTTTTTTTTTCCTTGCCATGGTCACACGGTGTCCACTGCAGATAA
GTGCTATTTTCTCCTTGAGACCGATGCTTTTCACATAATACC

Query= MSMg01no183_b23.b1 MSMg01no183_b23.b1 CHROMAT_FILE:
MSMg01no183_b23.b1 PHD_FILE: MSMg01no183_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:03 2005
         (320 letters)



>mm_chr17_10276047_10276766
          Length = 720

 Score =  596 bits (308), Expect = e-175
 Identities = 314/316 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtcttcataaggtgtttcccagcatatccatatccctacctagaactttatag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtcttcataaggtgtttcccagcatatccatatccctacctagaactttatag 264

                                                                       
Query: 65  gatgaatgactaacaaaggaacaagtgggttgtgtgtgttcatatgcatacatgtgtgta 124
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 gatgaatgactaacaaaggaacaagtgggttgtatgtgttcatatgcatacatgtgtgta 324

                                                                       
Query: 125 tatacatatataaggcatcagcacacttttattgaaaactacaatgtgaaaattgtcaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatacatatataaggcatcagcacacttttattgaaaactacaatgtgaaaattgtcaat 384

                                                                       
Query: 185 acaaactgttggtcttttgaagggtgaccctagatgtctgtttgctctgggacaattcat 244
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaaactgttggacttttgaagggtgaccctagatgtctgtttgctctgggacaattcat 444

                                                                       
Query: 245 gtaccgtttttatgacttagctcccttgatagtacaacctacccatgggaatttagaaga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaccgtttttatgacttagctcccttgatagtacaacctacccatgggaatttagaaga 504

                           
Query: 305 gcagaggaatttaaat 320
           ||||||||||||||||
Sbjct: 505 gcagaggaatttaaat 520


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space:   221121
Effective search space used:   221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no183_b23.g1 MSMg01no183_b23.g1 CHROMAT_FILE:
MSMg01no183_b23.g1 PHD_FILE: MSMg01no183_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:03 2005
         (183 letters)



>mm_chr17_10418134_10418716
          Length = 583

 Score =  321 bits (166), Expect = 2e-92
 Identities = 178/182 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcaaattttaaatttaactcagaagtgactttcagattatcacattcattagtaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatcaaattttaaatttaactcagaagtgactttcagattatcacattcattagtaacaa 323

                                                                       
Query: 61  gattcctttatggaaattagttttgaaaccatagtaatgaattgtgaagatgatttttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gattcctttatggaaattagttttgaaaccatagtaatgaattgtgaagatgatttttat 263

                                                                       
Query: 121 tttattgtttttttatggggacagaagacatttactctttataaatcaaatacgccaact 180
           ||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 262 tttattgtgcctttatggggacagaagacatttactctttataaatcaaatacgtcaact 203

             
Query: 181 tg 182
           ||
Sbjct: 202 tg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space:   100625
Effective search space used:   100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)