Query= MSMg01no184_o03.b1 MSMg01no184_o03.b1 CHROMAT_FILE:
MSMg01no184_o03.b1 PHD_FILE: MSMg01no184_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:26 2005
(424 letters)
>mm_chr17_48660818_48661641
Length = 824
Score = 733 bits (379), Expect = 0.0
Identities = 400/407 (98%)
Strand = Plus / Minus
Query: 17 gaattcagtgaagtgcttgctggttaagcatgagaccctccgttcaaatccccagaatcc 76
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 593 gaattcagtgaagtgcttgctggttaagcatgagaccctccgttcagatccccggaatcc 534
Query: 77 atgcaaaaatcaagcaccagggagtagaagcaagcagatacagggcaaggacacacattg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 533 atgcaaaaatcaagcaccagggagtagaagcaagcagatacagggcaaggacacatattg 474
Query: 137 tgtaaggtcactaccaagtgacatttcccacttgggttctaactacagctttcagtgact 196
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 473 tgtaaggtcactaccaagtgacatttcccacttggattctaactacagctttcagtgact 414
Query: 197 accttgtgcctagaaaataatgagcaggcattttaattccacattctagctgaagtctgg 256
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 413 accttgtgcctagaaaataatgagcaggcattttaattccacattctagctgaagtttgg 354
Query: 257 ccgaatgggaataattcagccaagatggacggcacggaaagatcaagatgatagccaaga 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ccgaatgggaataattcagccaagatggacggcacggaaagatcaagatgatagccaaga 294
Query: 317 ttagacagataggcaggcgggcaggcaggcaggcaaactgactaatagataggtaaatag 376
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 293 ttagacagataggcaggcgggcaggcaggcaggcagactgactaatagataggtaaatag 234
Query: 377 ataatagatggatggtagacacatagatagatgatagatagatagat 423
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 233 ataatagatggatggtagacacatagatagatgataggtagatagat 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_o03.g1 MSMg01no184_o03.g1 CHROMAT_FILE:
MSMg01no184_o03.g1 PHD_FILE: MSMg01no184_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:26 2005
(296 letters)
>mm_chr17_48491158_48491853
Length = 696
Score = 511 bits (264), Expect = e-149
Identities = 288/296 (97%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 1 tgagtgggaggagaactacagcttaagtccagtcaggagtcaatccagcctgcatgctct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 tgagtgggaggagaactacagcttaagtccagccaggagtcaatccagcctgcatgctct 260
Query: 61 cccctcctccaccaagacttctgtttctgctacttttgcttcagaggccgcctctgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccctcctccaccaagacttctgtttctgctacttttgcttcagaggccgcctctgcctc 320
Query: 121 aagcccgcctatactgggagcaggaatactggtgtgtacatctgtgttgagtggggaaga 180
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcccacctatcctgggagcaggaatactggtgtgtacatctgtgttgagtggggaaga 380
Query: 181 cagctggatggttgtctgtcaacttctgcactttggacattaaacattctccacacacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctggatggttgtctgtcaacttctgcactttggacattaaacattctccacacacca 440
Query: 241 atccaggactgcctattctttctagatggttctttgtgggtcttat-ttctgcccc 295
| ||||||||||||| ||||||||||||||||| ||||||||| || |||||||||
Sbjct: 441 acccaggactgcctactctttctagatggttctgtgtgggtct-atgttctgcccc 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
