CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAATGTTCTAGCGCACGTGACTTAGACATTTGGTAATGCTGTTGGC
TAAATTGTAAAAATACAAATTAATAAGTAAAACCTGCTGAGTTAGCAGCA
TGAGTTTGATAAACTATGGTAGGATTCCAGTTCGTCTGATGTCATATTTG
ATAGATACTTAAGATTGTAAAAAATAAACTTGATTTAAATCAGCAAGTCA
TTCTGACAACTTCTATTTCATGAATTTATTTTTTGTAAATTTGCCTAATG
TAGCTTCCAGAATCTTCTTGGTGTCTAAGTAAAATGAAATATTTGAGTGT
CTATATATCTGGCTTCTTACTCTCCCAAGAATATTACATATATTTGGATC
TGTTGATAAATATATTCTTTTGACACATAACTGATTTTGTTACTACAAAC
ACACATCGCTCCTGGGTACAAAAATGGTGCATTCATAACATGTATTGGCG
TATGGAATGCTGACATATGTGAACACAGTTGCCACATGTCTATTATTTAG
TAATCATTGTAAAATAAGAGTTACTAATAGCTAAAAGTGATAACCATTAC
ATATATACACGGATATAGCAGATGACGGCAAGCAGCTTTGATAGATATTC
AAGGTGGAAATTAGTGTGTTTCATTATAGAATAGAGACTAACTCTATCCT
TATATTACAATGACTGCTCCCCACCAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTGGTCTGGGCGCCAGTAGCACTGACCTCTGGAGACTTTCCATA
GTCTGCTCTCCTAAGTGACCCCTGAGCCAGGAAGAGTGGCGCACTGGCTG
CTGGGTCTTTTGTCTCCTGATCTAGCAGGAAGCACCATTGCCTTTCTATC
TATTTCTATTGTATTTTGGTGGCAGGTCAGAGGACAGCAGTGTCATTTTG
TGTGTTGAATGATCTCAGTAAGCTCTGTGCCTCCCTCCTGAGTGCAGTGT
TCTACCTTGCGCTGACTTTAAGAGTGGCTTAGGACTGAGCATGTATTTCC
ATAACACCAGCACTCGGGAAGCCGAGATGGGAGGAATCCCCCTGCCTCAA
AAATGTAGTCTGAATGATTTGTACTATCTTACCCTAGGAAGCAGTGTTTT
TTTCCTAAACATCCTGCCAATTTCATTTCCTGGGTATATTAATTAAATCT
CTTTTGTAGATGACACTTGGAAAATTTTGTAAGATTTTGGGTATGTTCCT
GCCTCATGAAAGCTTGGTGATTGCTACTTCCTCAGGGACAGAGACATACA
GATGGCCCATGGATATACATGGCTACCAGAAATTTGTCTTCCTATTGTGT
TTTTCCTACTCCTGTCTCCACCACTGGTAACTTATAATGCCTTAGCTTAT
TGGTTC

Query= MSMg01no193_f10.b1 MSMg01no193_f10.b1 CHROMAT_FILE:
MSMg01no193_f10.b1 PHD_FILE: MSMg01no193_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:42 2005
         (514 letters)



>mm_chr17_67416720_67417633
          Length = 914

 Score =  948 bits (490), Expect = 0.0
 Identities = 505/510 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaatgttctagcgcacgtgacttagacatttggtaatgctgttggctaaattgt 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatgttcaagggcacgtgacttagacatttggtaatgctgttggctaaattgt 264

                                                                       
Query: 65  aaaaatacaaattaataagtaaaacctgctgagttagcagcatgagtttgataaactatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaatacaaattaataagtaaaacctgctgagttagcagcatgagtttgataaactatg 324

                                                                       
Query: 125 gtaggattccagttcgtctgatgtcatatttgatagatacttaagattgtaaaaaataaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaggattccagttcgtctgatgtcatatttgatagatacttaagattgtaaaaaataaa 384

                                                                       
Query: 185 cttgatttaaatcagcaagtcattctgacaacttctatttcatgaatttattttttgtaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttgatttaaatcagcaagtcattctgacaacttctatttcatgaatttattttttgtaa 444

                                                                       
Query: 245 atttgcctaatgtagcttccagaatcttcttggtgtctaagtaaaatgaaatatttgagt 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 atttgcctaatgtagcttccagaatcttcttggtggctaagtaaaatgaaatatttgagt 504

                                                                       
Query: 305 gtctatatatctggcttcttactctcccaagaatattacatatatttggatctgttgata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctatatatctggcttcttactctcccaagaatattacatatatttggatctgttgata 564

                                                                       
Query: 365 aatatattcttttgacacataactgattttgttactacaaacacacatcgctcctgggta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatatattcttttgacacataactgattttgttactacaaacacacatcgctcctgggta 624

                                                                       
Query: 425 caaaaatggtgcattcataacatgtattggcgtatggaatgctgacatatgtgaacacag 484
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 625 caaaaatggtgcattcataacatgtattggcatatggaatgctgacatatgtgaacacag 684

                                         
Query: 485 ttgccacatgtctattatttagtaatcatt 514
           ||||||||| ||||||||||||||||||||
Sbjct: 685 ttgccacatatctattatttagtaatcatt 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no193_f10.g1 MSMg01no193_f10.g1 CHROMAT_FILE:
MSMg01no193_f10.g1 PHD_FILE: MSMg01no193_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:42 2005
         (285 letters)



>mm_chr17_67519750_67520434
          Length = 685

 Score =  543 bits (281), Expect = e-159
 Identities = 284/285 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggtctgggcgccagtagcactgacctctggagactttccatagtctgctctcctaagtg 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 tggtctgggcgccagtagcactgacctctggagactttccatagtctgttctcctaagtg 426

                                                                       
Query: 61  acccctgagccaggaagagtggcgcactggctgctgggtcttttgtctcctgatctagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acccctgagccaggaagagtggcgcactggctgctgggtcttttgtctcctgatctagca 366

                                                                       
Query: 121 ggaagcaccattgcctttctatctatttctattgtattttggtggcaggtcagaggacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggaagcaccattgcctttctatctatttctattgtattttggtggcaggtcagaggacag 306

                                                                       
Query: 181 cagtgtcattttgtgtgttgaatgatctcagtaagctctgtgcctccctcctgagtgcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cagtgtcattttgtgtgttgaatgatctcagtaagctctgtgcctccctcctgagtgcag 246

                                                        
Query: 241 tgttctaccttgcgctgactttaagagtggcttaggactgagcat 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgttctaccttgcgctgactttaagagtggcttaggactgagcat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space:   186576
Effective search space used:   186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)