Query= MSMg01no195_n12.b1 MSMg01no195_n12.b1 CHROMAT_FILE:
MSMg01no195_n12.b1 PHD_FILE: MSMg01no195_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:11 2005
(411 letters)
>mm_chr17_8014904_8015714
Length = 811
Score = 716 bits (370), Expect = 0.0
Identities = 397/406 (97%), Gaps = 2/406 (0%)
Strand = Plus / Minus
Query: 7 attccagatttgg-catcctggggctaaaatccagggctgtgtccctcgggcgactttgg 65
|||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 attccagattgggtc-tcctggggctaaaatccagggctgtgtccctcgggcgactttgg 553
Query: 66 acactatcaggtttcttttacttccagctccagagttctcacctttcttgactctggaga 125
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 552 acactatcaggtttcttttacttccagctccagagttctcacctttcttggctctgggga 493
Query: 126 cttaggaggagatctttgggtaccacgactactctgccaacctcaaggggtgtgaataag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cttaggaggagatctttgggtaccacgactactctgccaacctcaaggggtgtgaataag 433
Query: 186 aaacctgggcacaaacatttccagagttgctcccggaggttgattggggaaaggacctct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaacctgggcacaaacatttccagagttgctcccggaggttgattggggaaaggacctct 373
Query: 246 gtttacttatggaatttctccgttgtaactaatcttcagccatcaggagcttttgtttta 305
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 372 gtttacttatggaatttctccgttgtaactaaacttcagccgtcaggagcttttgtttta 313
Query: 306 attagaaaacacgggggtaggtgtttaaaactataaagatgatagcgagaagggaacagg 365
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 312 attagaaaacacgggggtaggtgtttaaaactataaagatgaaagcgagaagggaacagg 253
Query: 366 cctgcctgctgtgtagctagttatttgtgaacgcacagaatccatc 411
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 252 cctgcctgctgtgtagttagttatttgtgaacgcacagaatccatc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_n12.g1 MSMg01no195_n12.g1 CHROMAT_FILE:
MSMg01no195_n12.g1 PHD_FILE: MSMg01no195_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:11 2005
(191 letters)
>mm_chr17_7853619_7854208
Length = 590
Score = 346 bits (179), Expect = e-100
Identities = 188/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 1 attcattcagcatccaacttgaaatatttttttttcctattaaaatgcaaagacttctgg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 attcattcagcatccaacttgaaatatttttttt-cctattaaaatgcaaagacttctgg 259
Query: 61 tccaggcaagatacagagcattggattcagagggacatttggaaacaggaaaaagcagag 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 260 tccaggcaagatacagagcattgggttcagagggacatttggaaacaggaaaaagcagag 319
Query: 121 acctccctgggggctgtggagactcccgagggttagcctgaggtcaaggttgaggtagga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 acctccctgggggctgtggagactcccgagggttagcctgaggtcaaggttggggtagga 379
Query: 181 gagtgttaaac 191
|||||||||||
Sbjct: 380 gagtgttaaac 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 590
Length adjustment: 8
Effective length of query: 183
Effective length of database: 582
Effective search space: 106506
Effective search space used: 106506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
