Query= MSMg01no201_e20.b1 MSMg01no201_e20.b1 CHROMAT_FILE:
MSMg01no201_e20.b1 PHD_FILE: MSMg01no201_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:22 2005
(726 letters)
>mm_chr17_10758350_10759474
Length = 1125
Score = 1278 bits (661), Expect = 0.0
Identities = 679/685 (99%), Gaps = 3/685 (0%)
Strand = Plus / Minus
Query: 15 gaattcctttcttgattctttaccttatctttatcacaagctgaaaagctatttaatgat 74
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaattcctttcttgattctttaaattatctttatcacaagctgaaaagctatttaatgat 624
Query: 75 acaaccattattttttagaaaacaaggatgtaattg-gctcattactgttcagtggttct 133
|||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 623 acaa-tattattttttagaaaacaaggatgtaattgtg-tcattactgttcagtggttct 566
Query: 134 ctatgttaagcttcgtgttgacctgaaggcatttggatattatttatacacacaaaggat 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctatgttaagcttcgtgttgacctgaaggcatttggatattatttatacacacaaaggat 506
Query: 194 tgaggaaagtttgtagttgtcctaacagaaatacttcaattctgtattttgtgtgtgtgt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaggaaagtttgtagttgtcctaacagaaatacttcaattctgtattttgtgtgtgtgt 446
Query: 254 gtgtttgtatattataaacataagatagaaccaactcaccaaatggcttagatttcattc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgtttgtatattataaacataagatagaaccaactcaccaaatggcttagatttcattc 386
Query: 314 tctttagaaacactgaaaaaatattttgtcttttccacatttcttggtagatgaagttca 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctttagaaacactgaaaaaatattttgtcttttccacatttcttggtagatgaagttca 326
Query: 374 aaagtgttgggtaggttcagagagttcttagggtcagagcctgtgaactggcagcctgaa 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagtgttgggtaggttcagagagttcttagggtcagagcctgtgaactggcagcctgaa 266
Query: 434 gaagctaggctcagccacctcatccttgataggacaagagacagacgcctagagatggct 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaagctaggctcagccacctcatccttgataggacaagagacagacgcctagagatggct 206
Query: 494 cagtcaacaaagtgcctgttgtaaagatttgaattcaaatccccagcacccacataacag 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cagtcaacaaagtgcctgttgtaaagatttgaattcaaatccccagcacccacataacag 146
Query: 554 gtgtctcttagccctttctgcttcaaagccaatcctggtggctcagttccttccaacctc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gtgtctcttagccctttctgcttcaaagccaatcctggtggctcagttccttccaacctc 86
Query: 614 tgactcctgtgtcacacggggtctattctgggatgagggtaacctccccactttaaggtc 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tgactcctgtgtcacacggggtctattctgggatgagggtaacctccccactttaaggtc 26
Query: 674 agctcagcaaacttctacttttagt 698
|||||||||||||||||||||||||
Sbjct: 25 agctcagcaaacttctacttttagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 726
Length of database: 1125
Length adjustment: 10
Effective length of query: 716
Effective length of database: 1115
Effective search space: 798340
Effective search space used: 798340
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no201_e20.g1 MSMg01no201_e20.g1 CHROMAT_FILE:
MSMg01no201_e20.g1 PHD_FILE: MSMg01no201_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:22 2005
(645 letters)
>mm_chr17_10723426_10724471
Length = 1046
Score = 1172 bits (606), Expect = 0.0
Identities = 636/650 (97%), Gaps = 9/650 (1%)
Strand = Plus / Plus
Query: 1 ttggtgtcagacgcatgttgcattaattcattcagtaatccctaaattggcaaaaactca 60
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggtgtcagatgtatgttgcattaattcattcagtaatccctaaattggcaaaaactca 260
Query: 61 aggtgtagtacaagcacttcctttctgactgtgaatacatttggagataatattctagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgtagtacaagcacttcctttctgactgtgaatacatttggagataatattctagag 320
Query: 121 gaaatagaaagattatagaaaacagcagagtgtttttttaatgaaccaacaaaagctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatagaaagattatagaaaacagcagagtgtttttttaatgaaccaacaaaagctgag 380
Query: 181 aaaacctttatggaaaaaaatgtaaaaccatgaatgaaacactaaaatatctaaattcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacctttatggaaaaaaatgtaaaaccatgaatgaaacactaaaatatctaaattcac 440
Query: 241 agttatatgcattttt----aaaaaaatgaatgtcaacgttttttctctcaagcaagcag 296
|||||||||||||||| ||| ||||||||||||||| ||||||||||||||||
Sbjct: 441 agttatatgcatttttttttaaa----tgaatgtcaacgtttgatctctcaagcaagcag 496
Query: 297 atttcctacgagttaattcacaattcagaacatttccagagctaatccaagcaaggttgt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atttcctacgagttaattcacaattcagaacatttccagagctaatccaagcaaggttgt 556
Query: 357 tcctgaggggccgatcatcaattcagatggaagcagaagaaacaggccaggtggctgagg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcctgaggggccgatcatcaattcagatggaagcagaagaaacaggccaggtggctgagg 616
Query: 417 gtggaggggcgatatctattgtagtaacacatgaacagcagggggcaggcgtggcg-aga 475
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 617 gtggaggggcgatatctattgtagtaacacatgaacggcagggggcaggcgtggcggaga 676
Query: 476 actgtcccagggagaggctgggtggagaaggagggacagaacatccaatgcctgcagctg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 actgtcccagggagaggctgggtggagaaggagggacagaacatccaatgcctgcagctg 736
Query: 536 aggaagagaattactgctcgtgaatggagacttgttcaaatgaaaggcagaagcctaaaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aggaagagaattactgctcgtgaatggagacttgttcaaatgaaaggcagaagcctaaaa 796
Query: 596 ctacaaacagatgactatggtagtactagacacacaccctatatttcaaa 645
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctacaaacagatgactatggtagtactagacacacaccctatatttcaaa 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space: 657860
Effective search space used: 657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
