Query= MSMg01no202_h23.b1 MSMg01no202_h23.b1 CHROMAT_FILE:
MSMg01no202_h23.b1 PHD_FILE: MSMg01no202_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:20 2005
(653 letters)
>mm_chr17_73849369_73850422
Length = 1054
Score = 1143 bits (591), Expect = 0.0
Identities = 636/651 (97%), Gaps = 3/651 (0%)
Strand = Plus / Minus
Query: 5 gaattccctgg-aaaatagccatgaaaggtagaaagaagacagatgtgccactctagttt 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaattccctggaaaaatagccatgaaaggtagaaagaagacagatgtgccactctagttt 667
Query: 64 ccaaattaatgcgccggaaacataagacagtttgaagtgcatgcttcctctgcccagcca 123
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ccaaattaaagcgagggaaacataagacagtttgaagtgcatgcttcctctgcccagcca 607
Query: 124 gtgctgaggctccagatttgtggagcaggaggcagcagctgggagccccaagggtggatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtgctgaggctccagatttgtggagcaggaggcagcagctgggagccccaagggtggatg 547
Query: 184 tgattgaaaatgctccacagatcagcaggcacagggacacctccagggtagagagctcca 243
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 546 tgattgaaaatgctccacagatcagcaggcacggggacacctccagggtagagagctcca 487
Query: 244 atctgcagtggaacaagctgccaggcaatcacctcctaccccttcttcctcagcgttcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atctgcagtggaacaagctgccaggcaatcacctcctaccccttcttcctcagcgttcct 427
Query: 304 caccagagcctattattgacccctcccaagcatcatgccaacctgtctctggggtagttt 363
|||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 426 caccagagcctaggaatgacccctccaaagcatcatgccaacctgtctctgggataattt 367
Query: 364 ctaaaggaaagtctaaagggacatttctcttttattctctt-accttgctctgagtcact 422
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 366 ctaaaggaaagtctaaagggacatttctcttttattctcttga-cttgctctgagtcact 308
Query: 423 ggtgtcatcggagacagtaacgaagcctttgataaatagaaggcactattctgaatatgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggtgtcatcggagacagtaacgaagcctttgataaatagaaggcactattctgaatatgc 248
Query: 483 atggattaaccacatattctatgttgtggccctcttattagagcagagattctcaatctg 542
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atggattaaccatatattctacgttgtggccctcttattagagcagagattctcaatctg 188
Query: 543 tgggtcgcaaccccttggggagggtgtcaaacgaccctttcacaacggtcgcctaaaacc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgggtcgcaaccccttggggagggtgtcaaacgaccctttcacaacggtcgcctaaaacc 128
Query: 603 accctgcaaatcagatatttacattctgattcataacagtagaaaattaca 653
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 accctgcaaatcagatatttacattctgattcataacagtagaaaattaca 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space: 671292
Effective search space used: 671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_h23.g1 MSMg01no202_h23.g1 CHROMAT_FILE:
MSMg01no202_h23.g1 PHD_FILE: MSMg01no202_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:20 2005
(285 letters)
>mm_chr17_73749887_73750571
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Plus
Query: 1 tgttctgaagctataaaacagatgacacttcccattaaatcttaactagacttcctgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttctgaagctataaaacagatgacacttcccattaaatcttaactagacttcctgctc 260
Query: 61 aaaaagaatgtggcaagctccttaccagatacctgctgtgacatgcagcccattggtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaagaatgtggcaagctccttaccagatacctgctgtgacatgcagcccattggtccc 320
Query: 121 caagtgggaggtcccatagccatccctttcctctgtatggtggcagctgtgtacgaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagtgggaggtcccatagccatccctttcctctgtatggtggcagctgtgtacgaaggt 380
Query: 181 tctagaagccccttctaccactgtcataatctttgtgtaacagccacacagatcctgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctagaagccccttctaccactgtcataatctttgtgtaacagccacacagatcctgtgg 440
Query: 241 tggccacgcctggacttttgggggctctttccctagattctgaat 285
||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 441 tggccacgcctggacttctgggggctctttccctagaatctgaat 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
