Query= MSMg01no205_a18.b1 MSMg01no205_a18.b1 CHROMAT_FILE:
MSMg01no205_a18.b1 PHD_FILE: MSMg01no205_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:49 2005
(341 letters)
>mm_chr17_24483793_24484533
Length = 741
Score = 629 bits (325), Expect = 0.0
Identities = 337/343 (98%), Gaps = 5/343 (1%)
Strand = Plus / Minus
Query: 1 gctggccttgaactcacagagatcctcctgcctctgcctcccaagtgct--gcccattaa 58
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 569 gctggccttgaactcacagagatcctcctgcctctgcctcccaagtgctggg---attaa 513
Query: 59 aggtgtgtgccactgagtctagctgaaagactactacttaacattaacattttctcagtt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aggtgtgtgccactgagtctagctgaaagactactacttaacattaacattttctcagtt 453
Query: 119 tgtttcctaactagtgttgagcttcttcttcagctgggaaaagaaaaatggaggtgttga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtttcctaactagtgttgagcttcttcttcagctgggaaaagaaaaatggaggtgttga 393
Query: 179 agaaattaaaactccttctctggaagaatttcatcttaaaggtaaggaactgcttacctg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agaaattaaaactccttctctggaagaatttcatcttaaaggtaaggaactgcttacctg 333
Query: 239 gggggaagatgtgtgtcctcgggaatagctgcatagttaagtaagtttcagtcttcgttt 298
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gggggaagatgtgggtcctcgggaatagctgcatagttaagtaagtttcagtcttcgttt 273
Query: 299 ctcttcctgttgctgtgataaaacacccctgacaaaaggcaac 341
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctcttcctgttgctgtgataaaacacccctgacaaaaggcaac 230
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no205_a18.g1 MSMg01no205_a18.g1 CHROMAT_FILE:
MSMg01no205_a18.g1 PHD_FILE: MSMg01no205_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:49 2005
(242 letters)
>mm_chr17_24326290_24326931
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 caggacagccagggctatacagagaaaccctgtctcaaaaaaaacacaagccctgtctca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 caggacagccagggctatacagagaaaccctgtctcaaaaaaaacaaaagccctgtctca 260
Query: 61 aaaaacaaaacaaaacaaacaaacaagaaaggtatgaaggtaaaacactcatatacataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaacaaaacaaaacaaacaaacaagaaaggtatgaaggtaaaacactcatatacataa 320
Query: 121 gattaaaaaaaaaaaaagcaagtgctggaacggagctcagctggagagcgcctgtctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattaaaaaaaaaaaaagcaagtgctggaacggagctcagctggagagcgcctgtctagt 380
Query: 181 atgcataaggccttatgcttggcttccggcaagaagacaaaaagagagaagggagaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcataaggccttatgcttggcttccggcaagaagacaaaaagagagaagggagaaaag 440
Query: 241 aa 242
||
Sbjct: 441 aa 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
