Query= MSMg01no205_g11.b1 MSMg01no205_g11.b1 CHROMAT_FILE:
MSMg01no205_g11.b1 PHD_FILE: MSMg01no205_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:16 2005
(172 letters)
>mm_chr17_31874176_31874747
Length = 572
Score = 317 bits (164), Expect = 2e-91
Identities = 167/168 (99%)
Strand = Plus / Minus
Query: 5 gaattcaatcacgctcttttgaataacacactttggtactgctgtagttttatgatccaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaattcaatcacgctcttttgaataacacactttggtactgctgtagttttatgatccaa 278
Query: 65 aagttagtttgttacccatcagcatcgtgtgtgccaattccccaaaccctgtgccaatcg 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aagttagtttgttaaccatcagcatcgtgtgtgccaattccccaaaccctgtgccaatcg 218
Query: 125 ttgcagggttttgttgttttgggttgttttgttttgttttgtttttga 172
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ttgcagggttttgttgttttgggttgttttgttttgttttgtttttga 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no205_g11.g1 MSMg01no205_g11.g1 CHROMAT_FILE:
MSMg01no205_g11.g1 PHD_FILE: MSMg01no205_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:16 2005
(284 letters)
>mm_chr17_31768893_31769575
Length = 683
Score = 503 bits (260), Expect = e-147
Identities = 272/276 (98%), Gaps = 1/276 (0%)
Strand = Plus / Plus
Query: 9 tgctcccacctgtctccagacttctctgaaccaataacaccaaatgctagtggccacgca 68
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 209 tgctcccacctgtctccagacttctctgaaccaataacagtaaatgctagtggccacgca 268
Query: 69 cagggaaccggacttcaaggatgtaaaacacaaatgctttcacctacttgtttgatcttg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cagggaaccggacttcaaggatgtaaaacacaaatgctttcacctacttgtttgatcttg 328
Query: 129 aagacattagactaaggcaatgaagacaatcctaaaagccttttacaacagggtgggaac 188
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 329 aagacattagactaaggcaatgaagacaatcctaaaagctttttacaacagggtgggaac 388
Query: 189 gttgcagggctccaacctgggtgctttagaacagggtgggacactgtgcatgttcctaag 248
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gt-gcagggctccaacctgggtgctttagaacagggtgggacactgtgcatgttcctaag 447
Query: 249 ccaactaccgactgaatgtacatggaatggcttcta 284
||||||||||||||||||||||||||||||||||||
Sbjct: 448 ccaactaccgactgaatgtacatggaatggcttcta 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 683
Length adjustment: 9
Effective length of query: 275
Effective length of database: 674
Effective search space: 185350
Effective search space used: 185350
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
