Query= MSMg01no210_n03.b1 MSMg01no210_n03.b1 CHROMAT_FILE:
MSMg01no210_n03.b1 PHD_FILE: MSMg01no210_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:30 2005
(315 letters)
>mm_chr17_63331706_63332420
Length = 715
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Plus
Query: 5 gaattccatcatttaccccaaaatagcacttggtaagtatttctaacattctctgtatat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatcatttaccccaaaatagcacttggtaagtatttctaacattctctgtatat 264
Query: 65 aatttggcttaagaactgccacaagctctccctttcattgcctttttatgcattatatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatttggcttaagaactgccacaagctctccctttcattgcctttttatgcattatatgc 324
Query: 125 cgtaggcaaaccatgccctgacactgtggggtctgacctgagactacaaggctaatattg 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgtaggcaagccatgccctgacactgtggggtctgacctgagactacaaggctaatattg 384
Query: 185 tatgtcaaaatacttaaaaattatatactatatataaaagaatggaaatcacacattaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgtcaaaatacttaaaaattatatactatatataaaagaatggaaatcacacattaga 444
Query: 245 atgaaaatatatttttttctatcattctaaacgtacatagatatggtcaaaccagggtga 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgaaaatatttttttttctatcattctaaacgtacatagatatggtcaaaccagggtga 504
Query: 305 tagatattggt 315
|||||||||||
Sbjct: 505 tagatattggt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_n03.g1 MSMg01no210_n03.g1 CHROMAT_FILE:
MSMg01no210_n03.g1 PHD_FILE: MSMg01no210_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:30 2005
(282 letters)
>mm_chr17_63459621_63460301
Length = 681
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 actgggtggggatgtagagagatactgctatttgtaatatgtgttcttggaaaaatccct 60
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 481 actgggtggggatgtagagagataccgctatttgtaatatgtgttcttgg-aaaatccct 423
Query: 61 gaggcagaaagtccttaattagtgaggaaagtaagagtctgctacttaagctctggatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaggcagaaagtccttaattagtgaggaaagtaagagtctgctacttaagctctggatgc 363
Query: 121 aaggtgtactggagaagtgtttgagttcaggggaagctgtttcaaaggcctcggaactaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaggtgtactggagaagtgtttgagttcaggggaagctgtttcaaaggcctcggaactaa 303
Query: 181 tagccacgcactcctcctgattccgtcattctcgatgctgcttgtggattcgaaaactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tagccacgcactcctcctgattccgtcattctcgatgctgcttgtggattcgaaaactct 243
Query: 241 tccattcagccactttcagaaagttccttgtgctcattaggc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tccattcagccactttcagaaagttccttgtgctcattaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
