CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTACAAGATTGCCCAATCGAGCCAGCATGGATCAGGGCATTGTGCA
ATAATACTTCAGGATGACAGAGCCCCTGGACAGGGGCAAGGTAGGAAGGG
AGCAGCCCAAGTCACCTCATGGGTTGTGTCCGGAGGGCTGTCTTCAGGTC
TTCTACAACTTGGTTCCTCTTGTCTGTCTCCTCATCTTCAGTTTCATACA
GATTCTGCATCTGAGGCCCACAGGTAAAGGGGATAGAAGTTACATGGAGA
TGCTTGCCTTCCAGGCCTCTGGAAGCTTTTGGACCACAGGGTATCTGTGA
CTGGAGAGGGCACGCTTCCCTTGGGAAGGGTGGGGGACTCAGAGGATGTT
CTACTATGATAGTCACACTCTGGGAGACCCCAGGTTCTGGTCTGTGACTT
AACTTTCTGTATTTAGGAAATAGAAAGAATTACTGGCCCAGCCTAGTTCC
CAAAATATGTGATGTCCAATTGGATTAATATGTGTTTATCTAGGTTAAAA
ACTCTAACCTTCCGGGGGGTATGGTTTATAGTACTTTTCTTCTTCGTGTC
TTGTTTCTCCTCCTTTACCCCCTCTCCGACACTTGGGTCTTAAAAAATTG
GGAAAAAAGGGGGTTCCGGGGGTTTTTGGGCCATTTCGTGTGGGAATTTC
CCCAGATCCTCCGTTGAATTTTGGGCCAGGTCCCCATTATAATAAATG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGAATTTTGGGTTCTTTAAAAC
ACACACACACACACACACACACACACCCACACACACACACACACACACAC
ATTATTTGAATATGTTTAATATAAGAATATGTTTTCATTTTAATCCCAGG
TATTGGGATAAGGGGCTGCTTCACAGCAGCTGACTGTGATTTGCCTCATG
CTCTAGTAGAGGTATGTTTTTGCCAGCTGCAGGTAGTTTCTGTGATTGTG
TGACTTTTGGAATTCTGGGAACTTTTCAAAGAGTATATAAATGCTAGGGC
CCCAAAAGGCACAGTGGGTGGCTTTTGGCTATTTGCAGTGGGGATGGTTT
GTTAGTTATCATGTTCCCCCCCCCAGACAAGAAGAGAGAAATTAGATTCA
TATTAGTTGTCATGCTCAAAAAAGAGACAAGAAGAAATTAGATTCAAGGA
TCGTTCTCCCCTTTATCATCTTTCCTCTCCTATCTAGTGATGGGGGTGAA
AACTGTGTCTGGGTACAGGGTGCAAAAGAGAAGATCCCATAAAGCACCTA
ATACTGGGTACATGCTCCATTCCTCACCACTTTAGTTCCTGGGATAAGGT
CTCTCATGACCCAGAAATTTACTGAAGAATAAATGGCTGGTCCGTTGAAC
ACCAAAGAATCCCTCGCCCTTTCCCCTGCCTCCCCCGN

Query= MSMg01no235_h03.b1 MSMg01no235_h03.b1 CHROMAT_FILE:
MSMg01no235_h03.b1 PHD_FILE: MSMg01no235_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:47 2005
         (440 letters)



>mm_chr17_49632826_49633665
          Length = 840

 Score =  745 bits (385), Expect = 0.0
 Identities = 422/437 (96%), Gaps = 5/437 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctacaagattgcccaatcgagccagcatggatcagggcattgtgcaataatact 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctacaagattggccaatcgagccagcatggatcagggcattgtgcaataatact 263

                                                                       
Query: 64  tcaggatgacagagcccctggacaggggcaaggtaggaagggagcagcccaagtcacctc 123
           ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 264 tcaggatgacagagcccctgggcaggggcaaggtaggaagggagcagcccaggtcacctc 323

                                                                       
Query: 124 atgggttgtgtccggagggctgtcttcaggtcttctacaacttggttcctcttgtctgtc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgggttgtgtccggagggctgtcttcaggtcttctacaacttggttcctcttgtctgtc 383

                                                                       
Query: 184 tcctcatcttcagtttcatacagattctgcatctgaggcccacaggtaaaggggatagaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcctcatcttcagtttcatacagattctgcatctgaggcccacaggtaaaggggatagaa 443

                                                                       
Query: 244 gttacatggagatgcttgccttccaggcctctggaagcttttggaccacagggtatctgt 303
           || |||||||||||||||||||||||||||||||||||||||||| |||||||| ||   
Sbjct: 444 gtcacatggagatgcttgccttccaggcctctggaagcttttggatcacagggtgtc--- 500

                                                                       
Query: 304 gactggagagggcacgcttcccttgggaagggtgggggactcagaggatgttctactatg 363
             |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 --caagagagggcacgcttcccttgggaagggtaggggactcagaggatgttctactatg 558

                                                                       
Query: 364 atagtcacactctgggagaccccaggttctggtctgtgacttaactttctgtatttagga 423
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atagtcagactctgggagaccccaggttctggtctgtgacttaactttctgtatttagga 618

                            
Query: 424 aatagaaagaattactg 440
           |||||||||||||||||
Sbjct: 619 aatagaaagaattactg 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)