Query= MSMg01no260_e23.b1 MSMg01no260_e23.b1 CHROMAT_FILE:
MSMg01no260_e23.b1 PHD_FILE: MSMg01no260_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:22 2005
(370 letters)
>mm_chr17_70228497_70229268
Length = 772
Score = 615 bits (318), Expect = e-180
Identities = 358/372 (96%), Gaps = 2/372 (0%)
Strand = Plus / Plus
Query: 1 tttaagaaaggaaagaattgatagaaaacaagggatgcttgggaagtgtatgttcgcatg 60
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 201 tttaagaaaggaaagaatggatagaaaacaagggatgcttgggaattgtatgttagcatg 260
Query: 61 gatgattcctgctggtgagccaggagctgtgatgggcatgcttttcatgtataccacgtt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gatgattcctgctggtgagccaggagctgtgatgggcatgcttttcaggtataccacgtt 320
Query: 121 tttcctccagcatttaaatacctttccaggtcagcaacattgaatgcttcttggatctga 180
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 321 tttcctccagcatttaaataccttgccaggccagcaacattgaatgcttcttggctctga 380
Query: 181 gtactgtgctgattttggctactgcatatttatcttcttttcaaacat--gttatgatta 238
||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||
Sbjct: 381 gtactgtgctgattttggcaactgcatatttatcttattttcaaacatatgttatgatta 440
Query: 239 tacctatcataacacttcttgttttgtcgttggtcctccggtctccgcagtctccagccc 298
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacctatcataacacttcatgttttgtcgttggtcctccggtctccgcagtctccagccc 500
Query: 299 gcggcgacaagaacgacaaggatacctcttgatgccgtccttgccaccctctgagacggg 358
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcggcgacaagaaggacaaggacacctcttgatgccgtccttgccaccctctgagacggg 560
Query: 359 aacgacacagta 370
||||||||||||
Sbjct: 561 aacgacacagta 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 772
Length adjustment: 9
Effective length of query: 361
Effective length of database: 763
Effective search space: 275443
Effective search space used: 275443
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_e23.g1 MSMg01no260_e23.g1 CHROMAT_FILE:
MSMg01no260_e23.g1 PHD_FILE: MSMg01no260_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:22 2005
(671 letters)
>mm_chr17_70392628_70393698
Length = 1071
Score = 841 bits (435), Expect = 0.0
Identities = 447/451 (99%)
Strand = Plus / Minus
Query: 1 atcatcgccactctctgtatagaccagcaactgaagtactgaacagagcccagaacatgg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atcatcaccactctctgtatagaccagcaactgaagtactgaacagagcccagaacatgg 392
Query: 61 tggtctgattcatatccctgggctgccctgctccaaggttctcatttcagagcgctacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 391 tggtctgattcatatccctgggctgccctgctccaaggttctcatttcagagcactacat 332
Query: 121 attttagatttataggctaggaatgcatgactccccagaattaggtttagggagtaaaac 180
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 331 attttagattcataggctaggaatgcatgactccccagaattaagtttagggagtaaaac 272
Query: 181 agtaaatttattctaatggggtcttggaaaagaaagtaatctagagctttaaacaatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agtaaatttattctaatggggtcttggaaaagaaagtaatctagagctttaaacaatata 212
Query: 241 aataccagggctttttgttttttattagatattttctttatttacatttcaaatgctatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aataccagggctttttgttttttattagatattttctttatttacatttcaaatgctatc 152
Query: 301 ctgaaagttccctccaccctccacccaccctgcttgactacccacccactcccacttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ctgaaagttccctccaccctccacccaccctgcttgactacccacccactcccacttctt 92
Query: 361 ggcccaggcattcccttgtattggagcatataaagtttgcaagaccaaggggcctctctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ggcccaggcattcccttgtattggagcatataaagtttgcaagaccaaggggcctctctt 32
Query: 421 cccaatgatagccaactaggccatctttccc 451
|||||||||||||||||||||||||||||||
Sbjct: 31 cccaatgatagccaactaggccatctttccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
