Query= MSMg01no261_b08.b1 MSMg01no261_b08.b1 CHROMAT_FILE:
MSMg01no261_b08.b1 PHD_FILE: MSMg01no261_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:23 2005
(278 letters)
>mm_chr17_43986017_43986694
Length = 678
Score = 493 bits (255), Expect = e-144
Identities = 275/289 (95%), Gaps = 12/289 (4%)
Strand = Plus / Minus
Query: 2 ggaattcccaaaagtctctgtccagacttcaaaggaaaacaatttctggtattccatagc 61
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggaattcccaaaagtctctgcccagacttcaaaggaaaacaatttctggtattccatagc 254
Query: 62 tgatactcattataatgcttgcacaagttttgtggggttt------------ttgttgtt 109
||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 253 tgatactcattataatgtttgcacaagttttgtggggttttttttgttgttgttgttgtt 194
Query: 110 gttgctttaagaaaaatggttttgcttaagctggccacctgctcaagtcatcagctttaa 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gttgctttaagaaaaatggttttgcttaagctggccacctgctcaagtcatcagctttaa 134
Query: 170 ctcgaaataattttcttatttctgcacattccaatctctaccctattcacaaaagcttaa 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctcgaaataattttcttatttctgcacattccaatctctaccctattcacaaaagcttaa 74
Query: 230 caccactcgacatactacaaacaatgggctcttgatcctagaggtgcca 278
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 caccactcgacatactacaaacaatgggctcttgatcctagaggtgcca 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no261_b08.g1 MSMg01no261_b08.g1 CHROMAT_FILE:
MSMg01no261_b08.g1 PHD_FILE: MSMg01no261_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:23 2005
(301 letters)
>mm_chr17_43817297_43817992
Length = 696
Score = 526 bits (272), Expect = e-154
Identities = 291/300 (97%), Gaps = 5/300 (1%)
Strand = Plus / Plus
Query: 1 ttcctgctcgtgattgctatggatctatgattcgttgcttattatgttattaggttagga 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ttcctgctcgtgattgctatggatctatg-----ttgcttattatgttattaggttagga 255
Query: 61 agacgagaggacagaggagatgatggagtcagaattgggtaggagggacccaggagatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agacgagaggacagaggagatgatggagtcagaattgggtaggagggacccaggagatgt 315
Query: 121 ttgtaagacttcagaaagaaccccagggaaaggcaggaccttgagagtttctgagaaagg 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 316 ttgtaagacttcagaaagaaccccagggaaaggcaggaccttgagggtttctgagaaagg 375
Query: 181 aaagggagggtgtaagagacaggagagacagggaggagtaatgcagggagtgagccatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaagggagggtgtaagagacaggagagacagggaggagtaatgcagggagtgagccatgt 435
Query: 241 tcacaagctccctggtataggtgaaggttgggtatgggatccataagaaacattttctac 300
||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 436 tcacaagctccctggaaaaggtgaaggttgggtataggatccataagaaacattttctac 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 696
Length adjustment: 9
Effective length of query: 292
Effective length of database: 687
Effective search space: 200604
Effective search space used: 200604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
