Query= MSMg01no261_g12.b1 MSMg01no261_g12.b1 CHROMAT_FILE:
MSMg01no261_g12.b1 PHD_FILE: MSMg01no261_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:47 2005
(634 letters)
>mm_chr17_82596963_82597996
Length = 1034
Score = 648 bits (335), Expect = 0.0
Identities = 359/369 (97%), Gaps = 4/369 (1%)
Strand = Plus / Minus
Query: 5 gaattcataaccatactcagatatgcatgtttatcacagacatacatatcagatatatag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaattcataaccatactaagatatgcatgtttatcacagacatacatatcagatatatag 650
Query: 65 atatacatacagctacataataaatccatatatatatatatatatatacacacatatata 124
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 649 atatacatacagctacataataaatccatatatatatacatatatat----acatatata 594
Query: 125 tgtatgtatatacacacatacacacaaaggtaaacgtcattttcattcttatttggtaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgtatgtatatacacacatacacacaaaggtaaacgtcattttcattcttatttggtaca 534
Query: 185 gatagcaggcaactcttttcctagacagttattgatttatttgaggcttttgtagtcatt 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gatagtaggcaactcttttcctagacagttattgatttatttgaggcttttgtagtcatt 474
Query: 245 gtgagattctgctagatactaaacaatttataaactttcaacatcaaatgagcaagtcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtgagattctgctagatactaaacaatttataaactttcaacatcaaatgagcaagtcat 414
Query: 305 tcataatctctcaaatcaccaactgtgaaagttgccattttgtgtcctgacagggttatt 364
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 413 tcataatctctgaaatcaccaactgtgaaatttgccattttgtgtcctgacagggttatt 354
Query: 365 aacatgtga 373
|| ||||||
Sbjct: 353 aatatgtga 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_g12.g1 MSMg01no261_g12.g1 CHROMAT_FILE:
MSMg01no261_g12.g1 PHD_FILE: MSMg01no261_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:47 2005
(574 letters)
>mm_chr17_82395176_82396148
Length = 973
Score = 1054 bits (545), Expect = 0.0
Identities = 567/575 (98%), Gaps = 4/575 (0%)
Strand = Plus / Plus
Query: 1 agtgagaaggttacctattcagtaacattcaaatatacttctagcggagaccagtgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agtgagaaggttacctattcagtaacattcaaatatacttctagcggagaccagtgaaac 261
Query: 61 taattaggcattacaaagaacagagctagaatagctctgggctagtctacagagtgatta 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taattagtcattacaaagaacagagctagaatagctctgggctagtctacagagtgatta 321
Query: 121 cttaggacttaggagagtagggaggagtctcacacaaacaagggaacacacaatggccta 180
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cttaggacttaggagagtagcaaggagtctcacacaaacaagggaacacacaatggccta 381
Query: 181 gtgaataggtgggtttaccattaaaagagttagggaatccccctgagacaggtttcttca 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgaataggtgggtttaccat-aaaagagttagggaatccccctgagacaggtttcttca 440
Query: 241 ctagccaccccccaaaaaaacccagcatttactaagaacccctggtggtgggcttaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagccaccccccaaaaaaacccagcatttactaagaacccctggtggtgggcttaacaa 500
Query: 301 tagactagcattacacctgtctgcattctaagtgataaaccctggtccccccc-atcttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 tagactagcattacacctgtctgcattctaagtgataaaccctggtccccccccatcttt 560
Query: 360 tgatgtatacaagcacctttacctactgagccatactatggaaccctgagtaaacatttt 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatttatacaagcacctttacctactgagccatactatggaaccctgagtaaacatttt 620
Query: 420 ttaagaagaaataaatcaagttttctttctttcagtgataaaaaaagaagttagaataat 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 ttaagaagaaataaatcaagttttctttctttcagtgataaaaa--gaagttagaataat 678
Query: 480 tgattctgatgctgttgcaaattttattaaaggcaatgctttatcgcaatgtgtttaaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgattctgatgctgttgcaaattttattaaaggcaatgctttatcgcaatgtgtttaaat 738
Query: 540 agttttttcacagatatttacaaagtttaatttca 574
|||||||||||||||||||||||||||||||||||
Sbjct: 739 agttttttcacagatatttacaaagtttaatttca 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 973
Length adjustment: 10
Effective length of query: 564
Effective length of database: 963
Effective search space: 543132
Effective search space used: 543132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
