Query= MSMg01no261_l05.b1 MSMg01no261_l05.b1 CHROMAT_FILE:
MSMg01no261_l05.b1 PHD_FILE: MSMg01no261_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:09 2005
(234 letters)
>mm_chr17_10046236_10046869
Length = 634
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Minus
Query: 1 gatatctttactgcctcaagccaggctcagccaaagaagttgccattaaggtataatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gatatctttactgcctcaagccaggctcagccaaagaagttgccattaaggtataatcat 374
Query: 61 ttattgtgggtgtccttgtcctctttgatgggagaatgttgaggatccggccagtttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttattgtgggtgtccttgtcctctttgatgggagaatgttgaggatccggccagtttctc 314
Query: 121 caatccaagtccaccaatggctatgcaaggttcacaggtctcaggaagagaggaatatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caatccaagtccaccaatggctatgcaaggttcacaggtctcaggaagagaggaatatcc 254
Query: 181 tgctgtcacataaaggtggatgctcctggaagttactctctcctctggtcctg 233
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgctgtcacacaaaggtggatgctcctggaagttactctctcctctggtcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no261_l05.g1 MSMg01no261_l05.g1 CHROMAT_FILE:
MSMg01no261_l05.g1 PHD_FILE: MSMg01no261_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:09 2005
(395 letters)
>mm_chr17_9928950_9929744
Length = 795
Score = 756 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Plus
Query: 1 gaatatcaatttttcaatgtggttcttgctaagtgccctttaaaggacggagcaattaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaatatcaatttttcaatgtggttcttgctaagtgccctttaaaggacggagcaattaag 260
Query: 61 aacggtccaggcaaggctgatgacttgagggaggcagggatacttccagaggatcccagg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacggtccaagcaaggctgatgacttgagggaggcagggatacttccagaggatcccagg 320
Query: 121 gcacagagttaagaggttttcaagtcaaggtaaaacttcctgcaattaaggctgtgggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacagagttaagaggttttcaagtcaaggtaaaacttcctgcaattaaggctgtgggga 380
Query: 181 gactgagtgatgggtcgttctggcacccagagtgagattttacatgtagaaataaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactgagtgatgggtcgttctggcacccagagtgagattttacatgtagaaataaaaaca 440
Query: 241 tattcatttatcttggatttttctatccaagaatgtatcatttagcatttatttctaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcatttatcttggatttttctatccaagaatgtatcatttagcatttatttctaatt 500
Query: 301 gtatttttatgcaatgcctttatgggaacagaacataagcatgatgtatatgtgcttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatttttatgcaatgcctttatgggaacagaacataagcatgatgtatatgtgcttata 560
Query: 361 tatacatacatatgattatataatatatgattata 395
|||||||||||||||||||||||||||||||||||
Sbjct: 561 tatacatacatatgattatataatatatgattata 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
