Query= MSMg01no263_g23.b1 MSMg01no263_g23.b1 CHROMAT_FILE:
MSMg01no263_g23.b1 PHD_FILE: MSMg01no263_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:21 2005
(323 letters)
>mm_chr17_26123579_26124304
Length = 726
Score = 480 bits (248), Expect = e-140
Identities = 300/332 (90%), Gaps = 29/332 (8%)
Strand = Plus / Plus
Query: 5 gaattcaggatgctgtgttccc---acacctatgcctgaatggggaagacaccaaatttt 61
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggatgctgtg-----gggacacctatgcctgaatggggaagacaccaaatttt 259
Query: 62 ggcaagaggagagg--c----gctgtctccctgaagccccctgacagtggtgaagtcact 115
|||||||||||||| | ||||||| ||||| |||||||||||||||||||||||||
Sbjct: 260 ggcaagaggagaggagcagaggctgtcttcctga-gccccctgacagtggtgaagtcact 318
Query: 116 gctcattcatcagtaggtgatacccatgatcaggagaatggccaagctggatccaggaca 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctcattcatcagtaggtgatacccatgatcaggagaatggccaagctggatccaggaca 378
Query: 176 gtcctttgcagcatctctggtcactatgggtcatcactagtgcaatgatgtatcactgca 235
|| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 379 gt----------atctctggtcactacgggtcatcactagtgcaatgatgtatcactgca 428
Query: 236 ctaag----atgatcacacagcaggtaatgctggatcatcccaggttggctgagccctga 291
||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 429 ctaagtaagatgatcacacagcaggtaaagctggatcatcccaggttggctgagccctga 488
Query: 292 tctatgctagtgtagtatgggccagaagacag 323
||||||||||||||||||||||||||||||||
Sbjct: 489 tctatgctagtgtagtatgggccagaagacag 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 726
Length adjustment: 9
Effective length of query: 314
Effective length of database: 717
Effective search space: 225138
Effective search space used: 225138
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_g23.g1 MSMg01no263_g23.g1 CHROMAT_FILE:
MSMg01no263_g23.g1 PHD_FILE: MSMg01no263_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:21 2005
(644 letters)
>mm_chr17_26277023_26278066
Length = 1044
Score = 859 bits (444), Expect = 0.0
Identities = 448/450 (99%), Gaps = 2/450 (0%)
Strand = Plus / Minus
Query: 195 tagggatgcagctcagatggtagagtgctgcctagcaagcttgaggcctgggtttcatgc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 tagggatgcagctcagatggtagagtgctgcctagcaagcttgaggcctgggtttcatgc 985
Query: 255 ccagatgcccagcactgcataaaactgagagtgatgatgcacatctctgtatggaggtag 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ccagatgcccagcactgcataaaactgagagtgatgatgcacatctctgtatggaggtag 925
Query: 315 aggcagaggatgagaaagtcaaggttattcctggcttcatgagagttagagggtataaga 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aggcagaggatgagaaagtcaaggttattcctggcttcatgagagttagagggtataaga 865
Query: 375 gaccctgtcacaaaacaaaaaacaaccaaaaagggagtggctgtccttggttaccattca 434
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gacc--gtcacaaaacaaaaaacaaccaaaaagggagtggctgtccttggttaccattca 807
Query: 435 acagtgctgagccctgacttccatgaaatctatcttttgctcattctcacagaatacaca 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 acagtgctgagccctgacttccatgaaatctatcttttgctcattctcacagaatacaca 747
Query: 495 ctttacctgctaacaatgctgatggctagattactaatggctacaaggaaaaggcatgta 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctttacctgctaacaatgctgatggctagattactaatggctacaaggaaaaggcatgta 687
Query: 555 caaataagagatgggtcacaattatgacatttctgcagctaatgacttcttaggcaagct 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 caaataagagatgggtcacaattatgacatttctgcagctaatgacttcttaggcaagct 627
Query: 615 ataatctcagcctcagcaggaccagcctgt 644
||||||||||||||||||||||||||||||
Sbjct: 626 ataatctcagcctcagcaggaccagcctgt 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
