Query= MSMg01no265_g09.b1 MSMg01no265_g09.b1 CHROMAT_FILE:
MSMg01no265_g09.b1 PHD_FILE: MSMg01no265_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:52 2005
(315 letters)
>mm_chr17_47585266_47585980
Length = 715
Score = 503 bits (260), Expect = e-147
Identities = 295/308 (95%), Gaps = 5/308 (1%)
Strand = Plus / Minus
Query: 4 ggaattcacttctagaaataggatgctaacttcagttgatcatcaccttggccacaggag 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggaattcacttctagatataggatgctaacttcagttgatcatcaccttggccacaggag 248
Query: 64 tctttacacagttgtgagcatctctggaaatgaattgggcagaagt---ttgtttgtttg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 247 tctttacacagttgtgagcatctctggaaatgaattgggcagaagtttgttgtttgtttg 188
Query: 121 tttgttttttgttttaaccttctagttgaaagtgacaattctgtgtctatgaccttgaac 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 tttgttttttgttttaaccttctagttgaaagtgacaaatctgtgtctatgaccttgaac 128
Query: 181 ttctgat-tttcctgcctccaattctcaagtgcttcaatcacaggcaggctcagccagtc 239
||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 127 ttctgatcttt-ctgcctctaattctcaagtgcttcaatcacaggcgggctcagccagtc 69
Query: 240 ctgtttggtttttgtttttggaatgctgaatccagatgtgctagcaagcactttgctgac 299
||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||||||
Sbjct: 68 ctgtttggtttttgtttttgggacgctgaatccagaggtgcgagcaagcactttgctgac 9
Query: 300 tgaactac 307
||||||||
Sbjct: 8 tgaactac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_g09.g1 MSMg01no265_g09.g1 CHROMAT_FILE:
MSMg01no265_g09.g1 PHD_FILE: MSMg01no265_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:52 2005
(288 letters)
>mm_chr17_47491114_47491801
Length = 688
Score = 540 bits (279), Expect = e-158
Identities = 288/295 (97%), Gaps = 7/295 (2%)
Strand = Plus / Plus
Query: 1 actcaatcctcacagggaaaaactccacccaatgcaaggcacctttgtgcgtagttttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 actcaatcctcacagggaaaaactccacccaatgcaaggcacctttgtgcgtagttttca 253
Query: 61 agtaaagattgtaaagtcaggtaaaatgacttctcccaagtcacactgccaggaaagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agtaaagattgtaaagtcaggtaaaatgacttctcccaagtcacactgccaggaaagcaa 313
Query: 121 agctgatatttaaaccttgctgccgggtgtggtggcgcatgcccttaatcccagcacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agctgatatttaaaccttgctgccgggtgtggtggcgcatgcccttaatcccagcacttg 373
Query: 181 ggatcttaaaaaacaaaaaacaaaaaacaaaaaa-------aaccaaaaaccttgctatg 233
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 374 ggatcttaaaaaacaaaaaacaaaaaacaaaaaacaaaaaaaaccaaaaaccttgctatg 433
Query: 234 tccagatgtcgtcggtgcctggcctccatgctgctctggctttctgcttcatttt 288
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tccagatgtcgtcggtgcctggcctccatgctgctctggctttctgcttcatttt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
