Query= MSMg01no268_d20.b1 MSMg01no268_d20.b1 CHROMAT_FILE:
MSMg01no268_d20.b1 PHD_FILE: MSMg01no268_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:29 2005
(322 letters)
>mm_chr17_10891483_10892204
Length = 722
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%)
Strand = Plus / Minus
Query: 5 gaattctttgtttagctctgagccccatttttaatggtgttatttgattttctggagtcc 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 713 gaattctttgtttagctctgagccccatttttaatggggttatttgattttctggagtcc 654
Query: 65 agcttcttgagttctttgtatatattggatattagtcccctatctgatttaggataggca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agcttcttgagttctttgtatatattggatattagtcccctatctgatttaggataggca 594
Query: 125 aagatctgttggtggcctttttgtcttattgacggtgtcttttgccttacagaagctttg 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 593 aagatctgttggtggcctttttgtcttattgatggtgtcttttgccttacagaagctttg 534
Query: 185 cagtttcatcattagcgttttaaaatgtaactatttacatgacatgagtaatgcagatag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cagtttcatcattagcgttttaaaatgtaactatttacatgacatgagtaatgcagatag 474
Query: 245 gcacatagcatatcaatatatcacacagtgtagacatccatgagcgttgtctatggtaag 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 473 gcacatagcatatcaatatatcacacagcgtagacatccatgagcgttgtctatggtaag 414
Query: 305 aaatgtcctctcatgatg 322
||||||||||||||||||
Sbjct: 413 aaatgtcctctcatgatg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_d20.g1 MSMg01no268_d20.g1 CHROMAT_FILE:
MSMg01no268_d20.g1 PHD_FILE: MSMg01no268_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:29 2005
(293 letters)
>mm_chr17_10744790_10745484
Length = 695
Score = 555 bits (287), Expect = e-162
Identities = 291/293 (99%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 cactcaacaaattaagccccttcatgtttccctgtcctaaagatcatgtctgtgtctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactcaacaaattaagccccttcatgtttccctgtcctaaagatcatgtctgtgtctcag 260
Query: 61 gtgggagggctggccttggagagcttgtctcctgagcctg--gcatagacttttgtgtct 118
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gtgggagggctggccttggagagcttgtctcctgagcctgtggcatagacttttgtgtct 320
Query: 119 tggagcttgtggcatctgaagcagcttgcttttagcgggcaggtacaatgaggggccgtg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagcttgtggcatctgaagcagcttgcttttagcgggcaggtacaatgaggggccgtg 380
Query: 179 atagaactatcagaccctgttaggcctaaagaggaaatgaaggaagggactcgagttttc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagaactatcagaccctgttaggcctaaagaggaaatgaaggaagggactcgagttttc 440
Query: 239 tttcttatcaagtgatctccctagaatagaatggaatgtggaggggatggcgg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcttatcaagtgatctccctagaatagaatggaatgtggaggggatggcgg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 695
Length adjustment: 9
Effective length of query: 284
Effective length of database: 686
Effective search space: 194824
Effective search space used: 194824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
