Query= MSMg01no269_d09.b1 MSMg01no269_d09.b1 CHROMAT_FILE:
MSMg01no269_d09.b1 PHD_FILE: MSMg01no269_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:37 2005
(320 letters)
>mm_chr17_27132047_27132766
Length = 720
Score = 534 bits (276), Expect = e-156
Identities = 307/322 (95%), Gaps = 8/322 (2%)
Strand = Plus / Minus
Query: 5 gaattcctgacaccattcttccaagactgtatgagaagcagttctctcatcccggacact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaattcctgacaccattcttccaagactgtatgagaagcagttctctcatcccggacact 296
Query: 65 gcgttgagcttagtccagaggtggcagattggaagaggtttcgaaccctgagggcatccc 124
|||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 295 gcgttgagctgagtagagaggtggcagattggaagaggttttgaaccctgagggcatccc 236
Query: 125 cagcttctcagaggaaacacatataggagca--------ccctggggtcctttgaaggcg 176
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 cagcttctcagaggaaacacatataggagcataggagcgccctggggtcctttgaaggcg 176
Query: 177 ttgaccctaaggaagtgccaatatcagtgggtgtggccttgtttggagggagtgcgtcag 236
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 175 ttgaccctaaggaagtgccaatatcagtgggtgtggccttgtttggaggaagtgcgtcag 116
Query: 237 tgtggggggcaggctttgagatctatgctcaggctctgcccagtgtggaagagaccctcc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 115 tgtggggggcaggctttgagatctatgctcaggctctgcccagtgtggaagagacccccc 56
Query: 297 ctccgggctgtctttggatcaa 318
|||| |||||||||||||||||
Sbjct: 55 ctcctggctgtctttggatcaa 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_d09.g1 MSMg01no269_d09.g1 CHROMAT_FILE:
MSMg01no269_d09.g1 PHD_FILE: MSMg01no269_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:37 2005
(283 letters)
>mm_chr17_26981717_26982396
Length = 680
Score = 491 bits (254), Expect = e-143
Identities = 274/282 (97%), Gaps = 3/282 (1%)
Strand = Plus / Plus
Query: 1 ttcacaagggaggagggggtgggggacagagatagacagagacacagagagatacacaga 60
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacaagggaggaggcggtgggggacggagatagacagagacacagagagatacacaga 260
Query: 61 gagagacagacgaattcgatatgtaatcaccccgcccccccccccttttttttttttttt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gagagacagacgaattcgatatgtaatcaccccgcccccccccc---ttttttttttttt 317
Query: 121 gctaagaccttactgagaaagatttcattcaccatactccacaatcaatttgaggtcacc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gctaagaccttattgagaaagatttcattcaccatactccacaatcaatttgaggtcacc 377
Query: 181 cacgcccaagaaactttcaaccttcaacctccatgcacccttctcagcccaagtcaccac 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 378 cacgcccaagaaactttcaaccttcaacctccatgcacccttctcagccccagtcaccac 437
Query: 241 gaatctactttctgcctctatggattcgcatctcctgagtgg 282
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 438 gaatctacttcctgcctctatggattcgcatctcctgagtgg 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 680
Length adjustment: 9
Effective length of query: 274
Effective length of database: 671
Effective search space: 183854
Effective search space used: 183854
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
